| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5399 |
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| Symbol | metB |
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| ID | 6969039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 5038667 |
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| End bp | 5039827 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643389052 |
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| Product | cystathionine gamma-synthase |
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| Protein accession | YP_002273461 |
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| Protein GI | 209398697 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR02080] O-succinylhomoserine (thiol)-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.735878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCGTA AACAGGCCAC CATCGCAGTG CGTAGCGGGT TAAATGACGA CGAACAGTAT
GGTTGCGTTG TCCCTCCCAT CCATCTTTCC AGCACCTATA ACTTTACCGG ATTTAATGAA
CCGCGCGCGC ATGATTACTC GCGTCGCGGC AACCCAACGC GCGATGTGGT TCAGCGTGCG
CTGGCAGAAC TGGAAGGCGG TGCTGGTGCA GTACTTACTA ATACCGGCAT GTCCGCGATT
CATCTGGTAA CGACCGTCTT TTTGAAACCT GGCGATCTGC TGGTTGCGCC GCACGACTGC
TACGGCGGTA GCTATCGCCT GTTCGACAGC CTGGCGAAAC GCGGTTGCTA TCGCGTGTTG
TTTGTTGATC AAGGCGATGA ACAGGCATTA CGGGCAGCGC TGGCAGAAAA CCCCAAACTG
GTACTGGTAG AAAGCCCAAG TAATCCATTG TTACGCGTCG TGGATATTGC GAAAATCTGC
CATCTGGCAA GGGAAGTCGG GGCGGTGAGC GTGGTGGATA ACACCTTCTT AAGCCCGGCA
TTACAAAATC CGCTGGCATT AGGTGCCGAT CTGGTGTTGC ATTCATGTAC GAAATATCTG
AACGGTCACT CTGACGTGGT GGCTGGCGTG GTGATTGCTA AAGACCCGGA CGTTGTCACT
GAACTTGCCT GGTGGGCAAA CAATATTGGC GTGACGGGCG GCGCGTTTGA CAGCTATCTG
CTGCTACGCG GGTTGCGAAC GCTGGTGCCG CGTATGGAGC TGGCGCAGCG CAACGCGAAG
GCGATTGTGA AATATCTGCA AACCCAGCCG TTGGTGAAAA AACTGTATCA CCCGTCGCTG
CCGGAAAATC AGGGGCATGA AATTGCCGCG CGTCAGCAAA AAGGCTTTGG CGCAATGTTG
AGTTTTGAAC TGGATGGCGA TGAGCAGACG CTGCGCCGTT TCCTGGGCGG GCTGTCGTTA
TTTACGCTGG CGGAATCATT AGGGGGAGTG GAAAGTTTAA TCTCTCACGC CGCAACCATG
ACACATGCAG GCATGGCACC AGAAGCGCGT GCTGCCGCCG GGATCTCCGA GACGCTGCTG
CGTATCTCCA CCGGTATTGA AGATGGCGAA GATTTAATTG CCGACCTGGA AAATGGCTTC
CGGGCTGCAA ACAAGGGGTA A
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| Protein sequence | MTRKQATIAV RSGLNDDEQY GCVVPPIHLS STYNFTGFNE PRAHDYSRRG NPTRDVVQRA
LAELEGGAGA VLTNTGMSAI HLVTTVFLKP GDLLVAPHDC YGGSYRLFDS LAKRGCYRVL
FVDQGDEQAL RAALAENPKL VLVESPSNPL LRVVDIAKIC HLAREVGAVS VVDNTFLSPA
LQNPLALGAD LVLHSCTKYL NGHSDVVAGV VIAKDPDVVT ELAWWANNIG VTGGAFDSYL
LLRGLRTLVP RMELAQRNAK AIVKYLQTQP LVKKLYHPSL PENQGHEIAA RQQKGFGAML
SFELDGDEQT LRRFLGGLSL FTLAESLGGV ESLISHAATM THAGMAPEAR AAAGISETLL
RISTGIEDGE DLIADLENGF RAANKG
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