| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5393 |
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| Symbol | priA |
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| ID | 6970095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 5029217 |
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| End bp | 5031415 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643389047 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_002273456 |
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| Protein GI | 209398783 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.670889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTTG CCCACGTTGC CTTGCCCGTT CCGCTTCCTC GTACCTTTGA CTATCTCCTG
CCAGAAGGCA TGGCGGTTAA AGCCGGGTGT CGCGTGCGCG TGCCGTTTGG CAAACAGCAG
GAGCGCATCG GGGTTGTGGT GTCAGTTAGC GACGTCAGTG AGCTGCCGCT TAACGAGCTA
AAAGCGGTAG TCGAAGTGCT GGATAGTGAG CCGGTGTTTA CTCACTCCGT CTGGCGATTG
CTGCTCTGGG CGGCGGATTA CTATCATCAT CCGATTGGCG ATGTGCTGTT TCATGCCTTG
CCGATTTTAC TGCGCCAGGG GCGGCCTGCG GCGAACGCGC CGATGTGGTA CTGGTTTGCC
ACTGAACAAG GCCATGCGGT GGATCTGAAC AGCCTGAAAC GTTCGCCAAA GCAACAACAG
GCACTGGCGG CATTGCGGCA AGGCAAAATC TGGCGCGACC AGGTTGCCAC GCTTGAATTT
AATGATGCCG CGTTACAGGC GCTGCGCAAA AAAGGTCTGT GTGATTTAGC AAGTGAAACA
CCAGAGTTTA GCGACTGGCG AACGAACTAT GCCGTTTCTG GTGAACGGTT GCGATTGAAT
ACCGAACAGG CCACCGCCGT TGGCGCAATT CATAGCGCGG CGGATACCTT CTCTGCTTGG
CTGCTGGCGG GCGTTACAGG TTCCGGTAAA ACAGAGGTTT ATTTGAGCGT ACTGGAAAAC
GTGCTCGCTC AGGGCAAACA GGCGCTGGTG ATGGTGCCGG AAATCGGCCT GACACCGCAA
ACTATCGCCC GTTTTCGTGA ACGTTTTAAT GCCCCCGTAG AAGTTCTGCA TTCCGGCCTG
AACGACAGCG AGCGTCTTTC GGCGTGGTTG AAAGCGAAAA ATGGTGAGGC GGCGATTGTC
ATCGGCACCC GCTCCGCGCT GTTTACGCCG TTTAAAAATC TCGGTGTGAT TGTCATTGAT
GAAGAGCACG ACAGTTCCTA CAAGCAGCAG GAAGGCTGGC GCTATCATGC CCGCGACCTG
GCGGTTTATC GTGCGCACAG CGAGCAAATC CCGATTATTC TTGGCTCCGC AACACCCGCA
CTGGAAACGT TATGCAACGT CCAGCAGAAA AAATACCGCC TGCTGCGCCT GACGCGTCGG
GCGGGGAATG CGCGTCCGGC AATTCAACAT GTGCTGGATT TAAAAGGTCA GAAGGTGCAG
GCGGGGCTGG CTCCGGCGTT AATCACCCGT ATGCGCCAGC ATTTACAGGC CGACAACCAG
GTTATCCTCT TTCTTAACCG CCGTGGCTTT GCGCCTGCCT TGCTGTGCCA CGACTGCGGC
TGGATTGCCG AATGTCCACG TTGCGATCAC TACTACACGC TGCATCAGGC GCAACAGCAT
TTGCGCTGTC ACCACTGTGA CAGCCAACGC CCGGTGCCGC GCCAGTGCCC TTCCTGCGGT
TCCACGCACC TGGTACCCGT GGGGCTGGGC ACCGAACAGC TTGAACAGAC GCTCGCGCCG
TTATTCCCTG GTGTGCCCAT TTCTCGTATC GACCGCGATA CCACCAGCCG CAAAGGAGCG
CTGGAACAAC AACTGGCGGA AGTGCATCGC GGCGGCGCGA GGATATTGAT TGGCACGCAA
ATGCTGGCGA AAGGTCACCA CTTTCCGGAT GTGACGCTGG TAGCGTTACT GGATGTGGAC
GGCGCGCTGT TTTCTGCCGA TTTTCGCTCG GCAGAGCGTT TTGCCCAGCT ATACACCCAG
GTAGCAGGCC GTGCCGGGCG TGCGGGTAAA CAGGGCGAAG TGGTGCTGCA AACGCATCAT
CCGGAACACC CGCTATTGCA AACGTTGCTC TATAAAGGCT ACGACGCTTT TGCCGAACAG
GCACTGGCTG AGCGGCGAAT GATGCAACTG CCGCCGTGGA CCAGCCATGT GATTGTGCGT
GCGGAAGATC ATAACAATCA GCACGCGCCA TTGTTCCTGC AACAACTGCG TAATCTGATC
CTCTCCAGCC CGCTGGCAGA CGACAAATTG TGGGTTCTCG GTCCGGTTCC GGCACTGGCA
CCTAAACGTG GCGGTCGCTG GCGCTGGCAG ATATTGTTGC AGCACCCTTC CCGCGTGCGC
TTGCAACACA TCATTAACGG TACGCTGGCA CTCATCAATA CAATACCGGA TTCCCGTAAG
GTGAAATGGG TGCTGGATGT TGATCCGATT GAGGGTTAA
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| Protein sequence | MPVAHVALPV PLPRTFDYLL PEGMAVKAGC RVRVPFGKQQ ERIGVVVSVS DVSELPLNEL
KAVVEVLDSE PVFTHSVWRL LLWAADYYHH PIGDVLFHAL PILLRQGRPA ANAPMWYWFA
TEQGHAVDLN SLKRSPKQQQ ALAALRQGKI WRDQVATLEF NDAALQALRK KGLCDLASET
PEFSDWRTNY AVSGERLRLN TEQATAVGAI HSAADTFSAW LLAGVTGSGK TEVYLSVLEN
VLAQGKQALV MVPEIGLTPQ TIARFRERFN APVEVLHSGL NDSERLSAWL KAKNGEAAIV
IGTRSALFTP FKNLGVIVID EEHDSSYKQQ EGWRYHARDL AVYRAHSEQI PIILGSATPA
LETLCNVQQK KYRLLRLTRR AGNARPAIQH VLDLKGQKVQ AGLAPALITR MRQHLQADNQ
VILFLNRRGF APALLCHDCG WIAECPRCDH YYTLHQAQQH LRCHHCDSQR PVPRQCPSCG
STHLVPVGLG TEQLEQTLAP LFPGVPISRI DRDTTSRKGA LEQQLAEVHR GGARILIGTQ
MLAKGHHFPD VTLVALLDVD GALFSADFRS AERFAQLYTQ VAGRAGRAGK QGEVVLQTHH
PEHPLLQTLL YKGYDAFAEQ ALAERRMMQL PPWTSHVIVR AEDHNNQHAP LFLQQLRNLI
LSSPLADDKL WVLGPVPALA PKRGGRWRWQ ILLQHPSRVR LQHIINGTLA LINTIPDSRK
VKWVLDVDPI EG
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