| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5360 |
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| Symbol | rhaR |
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| ID | 6968742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 5001629 |
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| End bp | 5002567 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643389015 |
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| Product | transcriptional activator RhaR |
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| Protein accession | YP_002273424 |
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| Protein GI | 209396565 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.73393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTTTCT GCAATAACGC GAATCTTCTC AACGTATTTG TACGCCATAT TGCGAATAAT
CAATTTCGTT CTCTGGCCGA GGTAGCCACG GTGGCGCATC AGTTAAAACT TCTCAAAGAT
GATTTTTTTG CCAGCGACCA GCAGGCAGTC GCTGTGGCTG ACCGTTATCC GCAAGATGTC
TTTGCTGAAC ATACACATGA TTTTTGTGAG CTGGTGATTG TCTGGCGCGG TAATGGTCTG
CATGTACTCA ACGATCGCCC TTATCGCATT ACCCGTGGCG ATCTCTTTTA CATTCATGCT
GACGATAAAC ACTCCTACGC TTCCGTTAAC GATCTGGTTT TGCAGAATAT TATTTATTGC
CCGGAGCGGC TGAAGCTGAA TCTTGACTGG CAGGGGGCGA TTCCGGGATT TAGCGCCAGC
GCAGGGCAAC CACACTGGCG CTTAGGTAGC ATGGGGATGG CACAGGCGCG GCAGGTTATC
GGTCAGCTTG AGCATGAAAG TAGTCAGCAT GTGCCGTTTG CTAACGAAAT GGCAGAGTTG
CTGTTCGGGC AGTTGGTGAT GTTGCTGAAT CGCCATCGTT ACACCAGTGA TTCGTTGCCG
CCAACATCCA GCGAAACGTT GCTGGATAAG CTGATTACCC GGTTGGCGGC TAGCCTGAAA
AGTCCCTTTG CGCTGGATAA ATTTTGTGAT GAGGCATCGT GCAGTGAGCG CGTTTTGCGT
CAGCAATTTC GCCAGCAGAC TGGAATGACC ATCAATCAAT ATCTGCGGCA GGTCAGAGTG
TGTCATGCGC AATATCTTCT CCAGCATAGC CGCCTGTTAA TCAGTGATAT TTCGACCGAA
TGTGGCTTTG AAGATAGTAA CTATTTTTCG GTGGTGTTTA CCCGGGAAAC CGGGATGACG
CCCAGCCAGT GGCGTCATCT CAATTCGCAG AAAGATTAA
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| Protein sequence | MAFCNNANLL NVFVRHIANN QFRSLAEVAT VAHQLKLLKD DFFASDQQAV AVADRYPQDV
FAEHTHDFCE LVIVWRGNGL HVLNDRPYRI TRGDLFYIHA DDKHSYASVN DLVLQNIIYC
PERLKLNLDW QGAIPGFSAS AGQPHWRLGS MGMAQARQVI GQLEHESSQH VPFANEMAEL
LFGQLVMLLN RHRYTSDSLP PTSSETLLDK LITRLAASLK SPFALDKFCD EASCSERVLR
QQFRQQTGMT INQYLRQVRV CHAQYLLQHS RLLISDISTE CGFEDSNYFS VVFTRETGMT
PSQWRHLNSQ KD
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