| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5355 |
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| Symbol | rhaA |
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| ID | 6972016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4997796 |
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| End bp | 4999055 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643389011 |
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| Product | L-rhamnose isomerase |
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| Protein accession | YP_002273420 |
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| Protein GI | 209395912 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4806] L-rhamnose isomerase |
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| TIGRFAM ID | [TIGR01748] L-rhamnose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTC AACTGGAACA GGCCTGGGAG CTGGCGAAAC AGCGTTTCGC GGCAGTAGGG
ATTGATGTCG AGGAGGCGCT GCGCCAACTT GATCGTTTAC CCGTTTCAAT GCACTGCTGG
CAGGGTGATG ATGTTTCCGG TTTTGAAAAC CCGGAAGGTT CGCTGACCGG AGGGATTCAG
GCTACTGGCA ATTATCCGGG CAAAGCGCGT AATGCCAGTG AGCTACGTGC CGATCTGGAA
CAGGCTATGC GGCTGATTCC GGGGCCAAAA CGGCTTAATT TACATGCCAT CTATCTGGAA
TCAGACACGC CAGTCTCGCG CGACCAGATC AAACCTGAGC ACTTCAAAAA CTGGGTTGAA
TGGGCGAAAG CCAATCAGCT CGGTCTGGAT TTTAACCCCT CCTGTTTCTC GCATCCGCTA
AGCGCCGATG GCTTTACGCT TTCCCATGCC GACGACAGCA TTCGCCAGTT CTGGATTGAT
CACTGCAAGG CCAGCCGCCG CGTTTCGGCC TATTTTGGTG AGCAACTCGG CACACCGTCG
GTGATGAACA TCTGGATCCC GGATGGCATG AAAGATATCA CCGTTGACCG TCTCGCTCCG
CGCCAGCGTC TGCTGGCAGC TCTGGATGAG GTGATCAGCG AGAAGCTGGA TCCGGCGCAC
CATATCGACG CCGTTGAGAG CAAATTGTTT GGCATTGGCG CAGAGAGCTA CACGGTTGGC
TCCAATGAGT TTTACATGGG GTATGCCACC AGCCGCCAGA CTGCGCTGTG CCTGGACGCC
GGGCATTTCC ACCCGACTGA AGTGATTTCC GACAAGATTT CCGCCGCCAT GCTGTATGTG
CCGCAGTTGC TGCTGCACGT CAGCCGTCCG GTTCGCTGGG ACAGCGATCA CGTAGTGCTG
CTGGATGATG AAACCCAGGC GATTGCCAGT GAGATTGTTC GTCACGATCT GTTTGACCGG
GTGCATATCG GCCTCGACTT CTTTGATGCC TCTATCAACC GTATTGCTGC GTGGATCATT
GGTACACGCA ATATGAAAAA AGCCCTGCTG CGTGCGTTGC TGGAACCTAC CGCTGAGCTG
CGCAAGCTGG AAGCGGCGGG CGATTACACT GCGCGTCTGG CACTGCTGGA AGAGCAGAAA
TCGTTGCCGT GGCAGGCGGT CTGGGAAATG TATTGCCAAC GTCACGATAC GCCAGCAGGT
AGCGAATGGC TGGAGAGCGT GCGGGCATAT GAGAAAGAAA CTTTGAGTCG CCGCGGGTAA
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| Protein sequence | MTTQLEQAWE LAKQRFAAVG IDVEEALRQL DRLPVSMHCW QGDDVSGFEN PEGSLTGGIQ
ATGNYPGKAR NASELRADLE QAMRLIPGPK RLNLHAIYLE SDTPVSRDQI KPEHFKNWVE
WAKANQLGLD FNPSCFSHPL SADGFTLSHA DDSIRQFWID HCKASRRVSA YFGEQLGTPS
VMNIWIPDGM KDITVDRLAP RQRLLAALDE VISEKLDPAH HIDAVESKLF GIGAESYTVG
SNEFYMGYAT SRQTALCLDA GHFHPTEVIS DKISAAMLYV PQLLLHVSRP VRWDSDHVVL
LDDETQAIAS EIVRHDLFDR VHIGLDFFDA SINRIAAWII GTRNMKKALL RALLEPTAEL
RKLEAAGDYT ARLALLEEQK SLPWQAVWEM YCQRHDTPAG SEWLESVRAY EKETLSRRG
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