| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5354 |
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| Symbol | rhaD |
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| ID | 6971257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4996797 |
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| End bp | 4997621 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643389010 |
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| Product | rhamnulose-1-phosphate aldolase |
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| Protein accession | YP_002273419 |
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| Protein GI | 209400790 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR02624] rhamnulose-1-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAAACA TTACCCAGTC CTGGTTTGTC CAGGGAATGA TCAAAGCCAC CACCGATGCC
TGGCTGAAAG GCTGGGACGA GCGCAACGGC GGCAACCTGA CGCTGCGCCT GGATGACGCC
GATATCGCGC TTTATCACGA CAACTTCCAC CCACAACCGC GCTATATTCC GCTCAGCCAA
CCCATGCCTT TACTGGCAAA TACGCCGTTT ATTGTCACCG GCTCCGGCAA ATTCTTCCGT
AACGTCCAGC TCGATCCTGC AGCTAACTTA GGCGTCGTAA AAGTCGACAG CGATGGCGCG
GGCTACCATA TTCTCTGGGG GTTAACCAAC GAAGCCGTTC CAACTTCTGA ACTTCCGGCT
CACTTTCTCT CCCACTGCGA GCGCATTAAA GCCACCAACG GTAAAGATCG GGTGATCATG
CACTGCCACG CCACCAACCT GATCGCCCTC ACCTATGTAC TTGAAAACGA CACCGCGGTC
TTCACTCGCC AACTGTGGGA AGGCAGCACC GAGTGTCTGG TGGTATTCCC GGATGGCGTT
GGCATTCTGC CGTGGATGGT ACCCGGCACG GACGAAATCG GCCAGGCAAC TGCCCAAGAG
ATGCAAAAAC ATTCGCTGGT GTTGTGGCCC TTCCACGGTG TGTTCGGTTC CGGACCGACG
CTGGATGAAA CCTTCGGTTT AATCGACACC GCAGAAAAAT CAGCGGAAGT GTTAGTGAAG
GTGTATTCGA TGGGCGGCAT GAAACAGACT ATCAGCCGTG AAGAGTTGAT AGCGCTCGGC
CAGCGTTTCG GCGTTACACC ACTCGCCAGT GCGCTGGCGC TGTAA
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| Protein sequence | MQNITQSWFV QGMIKATTDA WLKGWDERNG GNLTLRLDDA DIALYHDNFH PQPRYIPLSQ
PMPLLANTPF IVTGSGKFFR NVQLDPAANL GVVKVDSDGA GYHILWGLTN EAVPTSELPA
HFLSHCERIK ATNGKDRVIM HCHATNLIAL TYVLENDTAV FTRQLWEGST ECLVVFPDGV
GILPWMVPGT DEIGQATAQE MQKHSLVLWP FHGVFGSGPT LDETFGLIDT AEKSAEVLVK
VYSMGGMKQT ISREELIALG QRFGVTPLAS ALAL
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