| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5352 |
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| Symbol | rafY2 |
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| ID | 6967534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4995038 |
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| End bp | 4996432 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643389008 |
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| Product | glycoporin RafY |
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| Protein accession | YP_002273417 |
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| Protein GI | 209399683 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAT CGACATTATC TTTAGCCATC GGTTTATTAT TGGCATGTAG TACCGGTATG
GCAAAAACAC AGCATTTAAT GCTGGAACAA CGCATGGCAT TGCTGGAAGA ACGCCTGGAA
GCGGCAGAAA TGCGGGCGGC AAAAGCAGAG AGCCAGGTTA AACAGCTGCA GACACAACAA
GCCGCTGAGA TCCGCGAAAT TAAGGCCGCT CAGGGCAATA CGCCGGTAAA TGGACAGGCA
ACGGCGGAAT CTGCAAAGAA AAATGCCACC TCACCTAATC TTTTGCTTTC AGGTTATGGC
GATTTAAAAA TCTACGGCGA CGTAGAATTT AATATGGATG CGGAAAGTAA TCATGGCCTG
CTGGCAATGA CCAACGCTGA TGTGAATAGC GATCCCACTA ATGAACAGTG GAATCTCAAT
GGTCGTATTC TGTTAGGTTT TGACGGTATG CGAAAGATGG ACAACGGTTA TTTCGCCGGG
TTCTCCGCAC AACCGCTGGG TGATATGCAC GGTTCAGTAA ATATCGATGA TGCGGTATTC
TTCTTTGGCA AAGAAAACGA CTGGAAGGTC AAAGTAGGCC GTTTTGAAGC CTACGATATG
TTCCCATTGA ATCAGGATAC CTTTGTTGAA CATTCCGGTA ATACTGCGAA CGATCTTTAT
GACGATGGCA GCGGTTATAT CTATATGATG AAAGAGGGCC GCGGGCGCTC TAACGCTGGC
GGTAATTTCC TCGTCAGCAA ACAACTCGAT AACTGGTATT TTGAATTAAA CACGTTACTT
GAAGACGGAA CATCTTTATA TAATGACGGT AATTATCATG GACGCGATAT GGAGCAGCAG
AAAAATGTTG CTTATCTGCG CCCAGTAATT GCCTGGTCGC CGACGGAAGA ATTCACCGTT
TCCGCAGCGA TGGAAGCGAA CGTGGTAAAT AATGCTTATG GTTATACCGA TAGCAAGGGT
AATTTTGTCG ATCAGTCCGA TCGTACCGGC TATGGTATGA GCATGACCTG GAACGGCCTG
AAAACGGATC CGGACAATGG CATTGTGGTT AATCTAAATA CCGCCTATTT AGATGCTAAT
AATGAGAAAG ATTTCACTGC CGGGATTAAC GCGCTGTGGA AACGTTTCGA GCTCGGTTAT
ATCTACGCGC ACAATAAGAT TGATGAATTC AGCGGTGTAG TTTGTGATAA CGACTGCTGG
ATTGATGATG AAGGGACGTA CACCATTCAC ACCATTCATG CGTCTTATCA GTTCGCTAAC
GTGATGGATA TGGAGAACTT TAATATTTAC CTCGGGACGT ATTACTCCAT TCTGGATAGC
GACGGCGATA AAAAACACGG TGATGATACT GATGACCGTT ACGGCGCACG CGTTCGCTTT
AAATACTTCT TCTGA
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| Protein sequence | MKKSTLSLAI GLLLACSTGM AKTQHLMLEQ RMALLEERLE AAEMRAAKAE SQVKQLQTQQ
AAEIREIKAA QGNTPVNGQA TAESAKKNAT SPNLLLSGYG DLKIYGDVEF NMDAESNHGL
LAMTNADVNS DPTNEQWNLN GRILLGFDGM RKMDNGYFAG FSAQPLGDMH GSVNIDDAVF
FFGKENDWKV KVGRFEAYDM FPLNQDTFVE HSGNTANDLY DDGSGYIYMM KEGRGRSNAG
GNFLVSKQLD NWYFELNTLL EDGTSLYNDG NYHGRDMEQQ KNVAYLRPVI AWSPTEEFTV
SAAMEANVVN NAYGYTDSKG NFVDQSDRTG YGMSMTWNGL KTDPDNGIVV NLNTAYLDAN
NEKDFTAGIN ALWKRFELGY IYAHNKIDEF SGVVCDNDCW IDDEGTYTIH TIHASYQFAN
VMDMENFNIY LGTYYSILDS DGDKKHGDDT DDRYGARVRF KYFF
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