Gene ECH74115_5351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5351 
Symbol 
ID6967928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4994114 
End bp4994560 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content51% 
IMG OID643389007 
Productputative fructose-like phosphotransferase system subunit EIIA 
Protein accessionYP_002273416 
Protein GI209396615 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR00848] PTS system, fructose subfamily, IIA component 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCTC TTACTGCAAG CTGTATTGAC CTGAATATTC AGGGCAATGG CGCTTATTCC 
GTTCTGAAGC AGTTGGCGAC AATGGCGTTA CAAAACGGTT TTATCACCGA CTCACACCAG
TTCCTGCAAA CCCTGCTGCT GCGCGAAAAA ATGCACTCCA CCGGTTTTGG TTCTGGTGTC
GCCGTGCCGC ACGGTAAAAG CACCTGCGTT AAACAACCGT TCGTGTTATT CGCCCGCAAA
GCGCAGGCTA TTGACTGGAA AGCCAGCGAC GGCGAAGACG TCAATTGCTG GATCTGCCTC
GGCGTACCGC AAAGTGGCGA AGAGGATCAG GTCAAAATCA TCGGCACACT GTGTCGCAAA
ATTATTCACC AGGAATTTAT TCATCAACTG CAACAGGGCG ATACCGACCA GGTGCTTGCC
TTGTTAAATC AAACCCTCAG CTCATAA
 
Protein sequence
MAALTASCID LNIQGNGAYS VLKQLATMAL QNGFITDSHQ FLQTLLLREK MHSTGFGSGV 
AVPHGKSTCV KQPFVLFARK AQAIDWKASD GEDVNCWICL GVPQSGEEDQ VKIIGTLCRK
IIHQEFIHQL QQGDTDQVLA LLNQTLSS