| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5325 |
|---|
| Symbol | |
|---|
| ID | 6969600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 4968294 |
|---|
| End bp | 4969169 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643388986 |
|---|
| Product | hypothetical membrane protein |
|---|
| Protein accession | YP_002273395 |
|---|
| Protein GI | 209396303 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.483179 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTTT TTACGTTATT TTCACCGGAT GGGGTCATGC TGGAAACAAA CGTGGTATGT
ATCGTTATCG CGTTAATGTT TCTTTATACC TTTGTGGGGA TATGCGCGGG ATTTGGCGGT
GGTTTAACCA CTATGCCGCT CGTCACGTTA ATGCTCCCCG TAAAAATGGC AACACCACTC
TCGGTAATTG TCGGCACCGC GACCGCCTTG TACGCCACCT GGCTGTCACG TAAAGAAACG
GATTGGCGAT CGGCAATGGT ACTGATTATT TTCTCGTTTC TGGGAATACC CGTCGGTTTA
TATGCACTGT CGTATTTACC CGACCATTTT ATGAAAGTGG GCTTAGGCGG ATTCCTTATC
CTGTACTCCT TTTACAGTAT GTTTATTCCA CGCCTGCCGA TTTATGACCG TAGCTGGATC
GCCGCACCTA TCGGTGCAGT AGCAGGCGCA TTAGGCGCAG CTTTCTCAAC CAACGGACCA
CCGATGGTTA TCTACGGTAT GCTGCGTAAC TTAGGCCCGG CGGCATTTCG TGGCACTCTG
AACGCTTTCT TCACCGCAAA CAACATCGCG GTGATCGGCG GGCTGGCGAC CAGCGGAATT
TTGACTGTTT CGATCTTTAA ACTGGTGCTG TTTTGTATTC CCACCATGAT CCTCGGTTCA
CTGGTTGGAC AATATGTGCA TAAACGTATT TCAGTCAAAG TGTTCCGTGT GATGGTCTTT
TTATTGCTGA TTGCCTCCGG TTCCATGTTG ATAAAAGGCG CGCTGGGAAT TCCCGCCGCT
GCCGCACTTC TACCTCCGTT TACCTTGTTA GTTATACTGC AACTGGTATT TGGTAAAAAA
GTGGCGGCAA TCCGTCAGGC TGAAGCAAGT AAATAA
|
|---|
| Protein sequence | MDFFTLFSPD GVMLETNVVC IVIALMFLYT FVGICAGFGG GLTTMPLVTL MLPVKMATPL
SVIVGTATAL YATWLSRKET DWRSAMVLII FSFLGIPVGL YALSYLPDHF MKVGLGGFLI
LYSFYSMFIP RLPIYDRSWI AAPIGAVAGA LGAAFSTNGP PMVIYGMLRN LGPAAFRGTL
NAFFTANNIA VIGGLATSGI LTVSIFKLVL FCIPTMILGS LVGQYVHKRI SVKVFRVMVF
LLLIASGSML IKGALGIPAA AALLPPFTLL VILQLVFGKK VAAIRQAEAS K
|
|---|
| |