Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5318 |
Symbol | |
ID | 6969191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4959361 |
End bp | 4960071 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643388979 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002273388 |
Protein GI | 209397414 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.33905 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAGA ATCAATCCAC CGTAGAAAAT GCAAAAGAGA AACTGGATCG GTGGTTGAAA GATGGCATCA CCACGCCGGG TGGAAAACTC CCTTCAGAAA GAGAGCTGGG AGAACTGCTG GGCATTAAAC GTATGACGCT GCGCCAGGCG TTGTTGAACC TCGAGGCAGA ATCCAAAATC TTCCGTAAGG ATCGTAAGGG GTGGTTCGTG ACCCAGCCGC GATTTAATTA CAGTCCGGAG CTGTCGGCGA GCTTTCAGCG GGCCGCAATT GAGCAAGGGC GAGAGCCTTC CTGGGGGTTT ACCGAGAAAA ACCGTACCAG CGATATTCCC GAGACGCTCG CGCCACTGAT TGCAGTGACA CCATCAACTG AACTCTATCG CATCACCGGC TGGGGGGCGC TGGAAGGACA TAAAGTTTTC TATCACGAAA CATATATTAA TCCTGAAGTT GCTCCGGGTT TTATTGAACA ACTTGAAAAC CACTCATTTT CTGCAGTCTG GGAAAAGTGC TACCAAAAAG AGACGGTAGT AAAAAAATTG ATTTTCAAAC CCGTCAGAAT GCCGGGCGAT ATCAGCAAGT ATCTTGGCGG TTCTGCGGGT ATGCCAGCGA TCTTAATTGA AAAGCATCGC GCCGACCAGC AAGGCAATAT TGTCCAGATA GATATTGAAT ATTGGCGATT TGAGGCCGTA GACCTCATCA TTAATCTGTA G
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Protein sequence | MAENQSTVEN AKEKLDRWLK DGITTPGGKL PSERELGELL GIKRMTLRQA LLNLEAESKI FRKDRKGWFV TQPRFNYSPE LSASFQRAAI EQGREPSWGF TEKNRTSDIP ETLAPLIAVT PSTELYRITG WGALEGHKVF YHETYINPEV APGFIEQLEN HSFSAVWEKC YQKETVVKKL IFKPVRMPGD ISKYLGGSAG MPAILIEKHR ADQQGNIVQI DIEYWRFEAV DLIINL
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