Gene ECH74115_5318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5318 
Symbol 
ID6969191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4959361 
End bp4960071 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content49% 
IMG OID643388979 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002273388 
Protein GI209397414 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.33905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGA ATCAATCCAC CGTAGAAAAT GCAAAAGAGA AACTGGATCG GTGGTTGAAA 
GATGGCATCA CCACGCCGGG TGGAAAACTC CCTTCAGAAA GAGAGCTGGG AGAACTGCTG
GGCATTAAAC GTATGACGCT GCGCCAGGCG TTGTTGAACC TCGAGGCAGA ATCCAAAATC
TTCCGTAAGG ATCGTAAGGG GTGGTTCGTG ACCCAGCCGC GATTTAATTA CAGTCCGGAG
CTGTCGGCGA GCTTTCAGCG GGCCGCAATT GAGCAAGGGC GAGAGCCTTC CTGGGGGTTT
ACCGAGAAAA ACCGTACCAG CGATATTCCC GAGACGCTCG CGCCACTGAT TGCAGTGACA
CCATCAACTG AACTCTATCG CATCACCGGC TGGGGGGCGC TGGAAGGACA TAAAGTTTTC
TATCACGAAA CATATATTAA TCCTGAAGTT GCTCCGGGTT TTATTGAACA ACTTGAAAAC
CACTCATTTT CTGCAGTCTG GGAAAAGTGC TACCAAAAAG AGACGGTAGT AAAAAAATTG
ATTTTCAAAC CCGTCAGAAT GCCGGGCGAT ATCAGCAAGT ATCTTGGCGG TTCTGCGGGT
ATGCCAGCGA TCTTAATTGA AAAGCATCGC GCCGACCAGC AAGGCAATAT TGTCCAGATA
GATATTGAAT ATTGGCGATT TGAGGCCGTA GACCTCATCA TTAATCTGTA G
 
Protein sequence
MAENQSTVEN AKEKLDRWLK DGITTPGGKL PSERELGELL GIKRMTLRQA LLNLEAESKI 
FRKDRKGWFV TQPRFNYSPE LSASFQRAAI EQGREPSWGF TEKNRTSDIP ETLAPLIAVT
PSTELYRITG WGALEGHKVF YHETYINPEV APGFIEQLEN HSFSAVWEKC YQKETVVKKL
IFKPVRMPGD ISKYLGGSAG MPAILIEKHR ADQQGNIVQI DIEYWRFEAV DLIINL