| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5281 |
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| Symbol | tatD |
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| ID | 6970948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4922966 |
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| End bp | 4923760 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643388944 |
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| Product | DNase TatD |
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| Protein accession | YP_002273358 |
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| Protein GI | 209397688 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.313749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.0903265 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTACA GGATGTTTGA TATCGGCGTT AATTTGACCA GTTCGCAATT TGCGAAAGAC
CGTGATGATG TTGTAGCGCG CGCTTTTGAC GCGGGAGTTA ATGGGCTACT CATCACCGGC
ACTAACCTGC GTGAAAGCCA GCAGGCGCAA AAGCTGGCGC GTCAGTATTC GTCCTGTTGG
TCAACGGCGG GCGTACATCC TCACGACAGC AGCCAGTGGC AAGCTGCGAC TGAAGAAGCG
ATTATTGAGC TGGCCGCGCA GCCAGAAGTG GTGGCGATTG GTGAATGTGG TCTCGACTTT
AACCGCAACT TTTCGACGCC GGAAGAGCAG GAACGCGCTT TTGTTGCCCA GCTACGCATT
GCCGCAGATT TAAACATGCC GGTATTTATG CACTGTCGCG ATGCCCACGA GCGGTTTATG
ACATTACTGG AGCCGTGGCT GGATAAACTG CCTGGTGCGG TTCTTCATTG CTTTACCGGC
ACACGCGAAG AGATGCAGGC GTGCGTGGCG CATGGAATTT ATATCGGCAT TACCGGTTGG
GTTTGCGATG AACGACGCGG ACTGGAGCTG CGGGAACTTT TGCCGTTGAT TCCGGCGGAA
AAATTACTGA TCGAAACTGA TGCGCCGTAT CTGCTCCCTC GCGATCTCAC GCCAAAGCCA
TCATCCCGGC GCAACGAGCC AGCCCATCTG CCCCATATTT TGCAACGTAT TGCGCACTGG
CGTGGAGAAG ATGCCGCATG GCTGGCTGCC ACCACGGATG CTAATGTCAA AACACTGTTT
GGGATTGCGT TTTAG
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| Protein sequence | MEYRMFDIGV NLTSSQFAKD RDDVVARAFD AGVNGLLITG TNLRESQQAQ KLARQYSSCW
STAGVHPHDS SQWQAATEEA IIELAAQPEV VAIGECGLDF NRNFSTPEEQ ERAFVAQLRI
AADLNMPVFM HCRDAHERFM TLLEPWLDKL PGAVLHCFTG TREEMQACVA HGIYIGITGW
VCDERRGLEL RELLPLIPAE KLLIETDAPY LLPRDLTPKP SSRRNEPAHL PHILQRIAHW
RGEDAAWLAA TTDANVKTLF GIAF
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