Gene ECH74115_5275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5275 
Symbol 
ID6971647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand+ 
Start bp4919048 
End bp4919653 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content56% 
IMG OID643388939 
Producthypothetical protein 
Protein accessionYP_002273353 
Protein GI209400799 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0592137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.315828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTA AACCTTTAGT GACGGCAGGA ATTGAAAGTC TGCTCAACAC CTTCCTGTAT 
CGCTCACCCG CGCTGAAAAC GGCCCGCTCG CGTCTGTTGG GCAAAGTGCT GCGCGTGGAG 
GTAAAAGGCT TTTCGACGTC ATTGATTCTG GTGTTCAGCG AACGCCAGGT TGATGTACTG 
GGCGAATGGG CAGGCGATGC TGACTGCACC GTTATCGCCT ACGCCAGTGT GTTGCCGAAA 
CTTCGCGATC GCCAGCAGCT TGCCGCCCTG ATTCGCAGTG GTGAGCTGGA AGTGCAGGGC 
GATATTCAGG TGGTGCAAAA CTTCGTTGCG CTGGCAGGTC TGGCAGAGTT CGACCCTGCG 
GAACTGCTGG CCCCTTATAC CGGTGATATC GCCGCTGAAG GAATCAGCAA AGCCATGCGC 
GGAGGCGCAA AGTTCCTGCA TCACGGCATT AAGCGCCAGC AACGTTATGT GGCGGAAGCC 
ATTACTGAAG AGTGGCGTAT GGCACCCGGT CCGCTTGAAG TGGCCTGGTT TGCGGAAGAG 
ACGGCTGCCG TCGAGCGTGC TGTTGATGCC CTGATCAAAC GGCTGGAAAA ACTGGAGGCT 
AAATGA
 
Protein sequence
MPFKPLVTAG IESLLNTFLY RSPALKTARS RLLGKVLRVE VKGFSTSLIL VFSERQVDVL 
GEWAGDADCT VIAYASVLPK LRDRQQLAAL IRSGELEVQG DIQVVQNFVA LAGLAEFDPA 
ELLAPYTGDI AAEGISKAMR GGAKFLHHGI KRQQRYVAEA ITEEWRMAPG PLEVAWFAEE 
TAAVERAVDA LIKRLEKLEA K