Gene ECH74115_5263 details

Gene Information

• Locus tag: ECH74115_5263
• Symbol: recQ
• ID: 6970470
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli O157:H7 str. EC4115
• Kingdom: Bacteria
• Replicon accession: NC_011353
• Strand: +
• Start bp: 4905283
• End bp: 4907118
• Gene Length: 1836 bp
• Protein Length: 611 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 643388927
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_002273341
• Protein GI: 209400089
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 51
• Fosmid unclonability p-value: 0.695622
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAATGTGG CGCAGGCGGA AGTGTTGAAT CTGGAGTCCG GAGCTAAACA GGTTTTACAA 
GAAACCTTTG GCTACCAACA GTTTCGCCCC GGCCAGGAAG AAATTATCGA CACTGTGCTT 
TCCGGTCGCG ATTGCCTGGT CGTCATGCCC ACCGGTGGCG GAAAATCCCT TTGCTATCAA 
ATTCCTGCCT TATTGCTAAA CGGCCTTACC GTGGTTGTTT CACCGCTGAT TTCGTTGATG 
AAAGATCAGG TGGATCAACT GCAAGCCAAC GGCGTGGCGG CGGCGTGCCT TAACTCGACG 
CAAACCCGCG AACAGCAACT TGAAGTGATG ACAGGCTGCC GCACCGGGCA AATTCGTCTG 
CTTTATATCG CCCCGGAACG CCTGATGCTG GATAACTTTC TTGAGCATCT GGCGCACTGG 
AATCCGGTGT TATTAGCCGT TGATGAAGCG CACTGTATCT CCCAATGGGG CCACGATTTC 
CGCCCGGAAT ATGCCGCGCT CGGTCAGTTG CGCCAGCGGT TCCCGACGCT GCCGTTTATG 
GCGCTGACCG CCACAGCCGA CGACACCACG CGCCAGGATA TCGTGCGCCT GCTGGGGCTG 
AACGATCCGC TGATTCAAAT CAGCAGTTTT GACCGTCCGA ATATTCGCTA CATGCTGATG 
GAGAAATTCA AACCGCTCGA TCAGTTGATG CGCTACGTGC AGGAACAGCG CGGTAAGTCC 
GGCATTATCT ACTGCAACAG CCGGGCGAAA GTAGAAGACA CCGCTGCGCG CCTGCAAAGC 
AAGGGTATTA GCGCGGCGGC CTATCATGCC GGGCTGGAAA ATAATGTCCG CGCCGACGTG 
CAGGAGAAAT TCCAGCGCGA TGACCTGCAA ATTGTGGTGG CGACGGTGGC GTTCGGCATG 
GGCATCAATA AACCAAACGT TCGCTTCGTG GTCCACTTTG ATATTCCGCG CAATATCGAA 
TCCTATTATC AGGAAACCGG TCGCGCCGGG CGTGATGGCC TGCCTGCGGA AGCGATGTTG 
TTTTACGATC CAGCTGATAT GGCGTGGCTG CGCCGTTGTC TGGAAGAGAA GCCGCAGGGG 
CAGTTGCAGG ATATCGAGCG CCACAAACTC AATGCGATGG GCGCGTTTGC CGAAGCGCAA 
ACTTGCCGTC GTCTGGTATT GCTGAACTAT TTTGGCGAAG GGCGTCAGGA GCCGTGCGGG 
AACTGCGATA TCTGCCTCGA TCCGCCGAAA CAGTACGACG GTTCAACCGA TGCTCAGATT 
GCCCTTTCCA CCATTGGTCG TGTGAATCAG CGGTTTGGGA TGGGTTATGT GGTGGAAGTG 
ATTCGTGGTG CTAATAACCA GCGTATCCGC GACTATGGTC ATGACAAACT GAAAGTCTAT 
GGCATGGGCC GTGATAAAAG CCATGAACAT TGGGTGAGCG TGATCCGCCA GCTGATTCAC 
CTCGGCCTGG TGACGCAAAA TATTGCCCAG CATTCTGCCC TACAACTGAC AGAGGCCGCG 
CGCCCGGTGC TGCGCGGCGA ATCCTCTTTA CAACTTGCCG TGCCGCGTAT CGTGGCGCTC 
AAACCGAAAG CGATGCAGAA ATCGTTCGGC GGCAACTATG ATCGCAAACT GTTCGCCAAA 
TTACGCAAAC TGCGTAAATC GATTGCCGAT GAAAGTAATG TCCCGCCGTA CGTGGTGTTT 
AACGACGCAA CCTTGATTGA GATGGCTGAA CAGATGCCGA TCACCGCCAG CGAAATGCTC 
AGCGTTAACG GCGTTGGGAT GCGCAAGCTG GAACGCTTTG GTAAACCGTT TATGGCGCTG 
ATTCGTGCGC ATGTCGATGG CGACGACGAA GAGTAG 

 

Protein sequence

MNVAQAEVLN LESGAKQVLQ ETFGYQQFRP GQEEIIDTVL SGRDCLVVMP TGGGKSLCYQ 
IPALLLNGLT VVVSPLISLM KDQVDQLQAN GVAAACLNST QTREQQLEVM TGCRTGQIRL 
LYIAPERLML DNFLEHLAHW NPVLLAVDEA HCISQWGHDF RPEYAALGQL RQRFPTLPFM 
ALTATADDTT RQDIVRLLGL NDPLIQISSF DRPNIRYMLM EKFKPLDQLM RYVQEQRGKS 
GIIYCNSRAK VEDTAARLQS KGISAAAYHA GLENNVRADV QEKFQRDDLQ IVVATVAFGM 
GINKPNVRFV VHFDIPRNIE SYYQETGRAG RDGLPAEAML FYDPADMAWL RRCLEEKPQG 
QLQDIERHKL NAMGAFAEAQ TCRRLVLLNY FGEGRQEPCG NCDICLDPPK QYDGSTDAQI 
ALSTIGRVNQ RFGMGYVVEV IRGANNQRIR DYGHDKLKVY GMGRDKSHEH WVSVIRQLIH 
LGLVTQNIAQ HSALQLTEAA RPVLRGESSL QLAVPRIVAL KPKAMQKSFG GNYDRKLFAK 
LRKLRKSIAD ESNVPPYVVF NDATLIEMAE QMPITASEML SVNGVGMRKL ERFGKPFMAL 
IRAHVDGDDE E