Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5221 |
Symbol | rfbB2 |
ID | 6969387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4869024 |
End bp | 4870091 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643388886 |
Product | dTDP-glucose 4,6-dehydratase |
Protein accession | YP_002273306 |
Protein GI | 209399629 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.175839 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAGA TTCTGATAAC AGGCGGTGCC GGGTTTATTG GCTCGGCGCT GGTGCGTTAT ATCATCAACG AAACGAGCGA CGCGGTGGTA GTGGTCGATA AGCTGACCTA CGCCGGAAAC CTGATGTCGC TGGCACCGGT CGCGCAAAGC GAGCGCTTTG CCTTTGAGAA AGTTGATATC TGCGATCGGG CAGAACTGGC GCGCGTATTC ACTGAGCATC AGCCAGACTG TGTCATGCAT CTGGCAGCCG AAAGCCATGT TGACCGTTCT ATTGACGGCC CGGCAGCGTT TATTGAAACC AACATTGTCG GGACTTATAC ATTGCTTGAA GCGGCGCGGG CTTACTGGAA TGCGCTGACG GAAGATAAAA AATCAGCGTT CCGTTTTCAT CATATCTCCA CTGACGAAGT ATATGGTGAC CTGCACTCGA CGGATGATTT CTTCACCGAA ACCACGCCGT ATGCGCCGAG CAGCCCTTAT TCCGCGTCAA AAGCCAGCAG CGACCATCTG GTGCGCGCCT GGCTGCGAAC CTATGGTCTG CCAACGCTTA TCACCAACTG CTCGAATAAC TACGGTCCTT ACCACTTTCC GGAAAAACTG ATCCCGCTGA TGATCCTCAA CGCGCTGGCG GGTAAACCGC TACCGGTATA TGGCAACGGG CAGCAAATCC GTGACTGGCT GTATGTTGAA GATCACGCCC GCGCGCTGTA TTGCGTGGCG ACCACCGGGA AAGTCGGTGA AACCTATAAT ATTGGTGGTC ACAACGAGCG TAAGAATCTC GATGTTGTGG AAACCATTTG CGAGCTGCTG GAAGAACTGG CTCCGAACAA GCCGCAAGGC GTGGTGCATT ATCGTGACTT GATCACCTTT GTCGCTGACC GTCCGGGGCA TGATCTGCGC TATGCCATTG ATGCTTCGAA AATTGCCCGT GAACTTGGCT GGCTGCCGCA GGAAACCTTT GAAAGTGGAA TGCGTAAAAC GGTGCAGTGG TATCTGGCTA ATGAAAGCTG GAGGAAGCAG GTGCAGGACG GCAGCTATCA GGGCGAGCGT TTAGGTCTGA AAGGCTAA
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Protein sequence | MRKILITGGA GFIGSALVRY IINETSDAVV VVDKLTYAGN LMSLAPVAQS ERFAFEKVDI CDRAELARVF TEHQPDCVMH LAAESHVDRS IDGPAAFIET NIVGTYTLLE AARAYWNALT EDKKSAFRFH HISTDEVYGD LHSTDDFFTE TTPYAPSSPY SASKASSDHL VRAWLRTYGL PTLITNCSNN YGPYHFPEKL IPLMILNALA GKPLPVYGNG QQIRDWLYVE DHARALYCVA TTGKVGETYN IGGHNERKNL DVVETICELL EELAPNKPQG VVHYRDLITF VADRPGHDLR YAIDASKIAR ELGWLPQETF ESGMRKTVQW YLANESWRKQ VQDGSYQGER LGLKG
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