Gene ECH74115_5218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5218 
Symbol 
ID6971747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4865533 
End bp4866579 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content53% 
IMG OID643388883 
Productlipopolysaccharide biosynthesis protein WzzE 
Protein accessionYP_002273303 
Protein GI209399839 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3765] Chain length determinant protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.813852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAC CAATGCCTGG GAAACCGGCC GAAGACGCTG AAAATGAACT GGATATTCGT 
GGGTTGTTTC GTACCTTGTG GGCTGGGAAG CTATGGATTA TTGGCATGGG GCTGGCGTTT
GCGTTAATCG CGCTGGCGTA TACGTTTTTT GCTCGTCAGG AGTGGAGCTC GACGGCGATT
ACCGATCGTC CAACGGTGAA TATGCTGGGG GGATATTACT CGCAGCAGCA ATTTTTGCGT
AACCTGGATG TCCGTTCAAA CATGGCTTCT GCCGACCAAC CATCGGTCAT GGACGAAGCC
TATAAAGAGT TTGTTATGCA ACTGGCCTCG TGGGATACCC GCAGAGAGTT CTGGCTGCAA
ACCGACTATT ACAAGCAGCG GATGGTGGGC AACAGCAAAG CCGATGCGGC GTTGCTGGAT
GAAATGATTA ACAACATCCA GTTTATCCCC GGAGACTTTA CCCGCGCGGT CAATGACAGC
GTGAAGCTTA TTGCCGAAAC CGCGCCTGAC GCTAATAACC TGTTACGTCA GTATGTTGCT
TTTGCCAGCC AGCGTGCAGC CAGCCATCTG AATGATGAGC TGAAAGGCGC ATGGGCGGCG
CGTACCATCC AGATGAAAGC ACAGGTGAAG CGTCAGGAAG AGGTGGCGAA AGCCATCTAC
GACCGCCGGA TGAACAGCAT TGAGCAGGCG CTGAAAATTG CTGAGCAGCA TAATATTTCG
CGCAGTGCGA CAGATGTGCC TGCCGAGGAA TTACCTGATT CAGAAATGTT CCTGCTTGGG
CGTCCAATGC TCCAGGCTCG ACTGGAAAAT TTACAGGCCG TCGGTCCGGC CTTTGATCTC
GACTATGATC AGAATCGGGC CATGTTAAAC ACCCTGAATG TTGGTCCAAC CCTGGATCCG
CGTTTTCAGA CCTATCGCTA TTTGCGTACG CCGGAAGAAC CGGTAAAACG CGATAGCCCA
CGTCGTGCCT TCCTGATGAT TATGTGGGGC ATTGTCGGGG GGCTGATCGG GGCTGGTGTC
GCATTAACCC GCCGTTGCTC GAAATAG
 
Protein sequence
MTQPMPGKPA EDAENELDIR GLFRTLWAGK LWIIGMGLAF ALIALAYTFF ARQEWSSTAI 
TDRPTVNMLG GYYSQQQFLR NLDVRSNMAS ADQPSVMDEA YKEFVMQLAS WDTRREFWLQ
TDYYKQRMVG NSKADAALLD EMINNIQFIP GDFTRAVNDS VKLIAETAPD ANNLLRQYVA
FASQRAASHL NDELKGAWAA RTIQMKAQVK RQEEVAKAIY DRRMNSIEQA LKIAEQHNIS
RSATDVPAEE LPDSEMFLLG RPMLQARLEN LQAVGPAFDL DYDQNRAMLN TLNVGPTLDP
RFQTYRYLRT PEEPVKRDSP RRAFLMIMWG IVGGLIGAGV ALTRRCSK