Gene ECH74115_5206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5206 
SymbolilvA 
ID6968566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4851873 
End bp4853417 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content59% 
IMG OID643388871 
Productthreonine dehydratase 
Protein accessionYP_002273291 
Protein GI209398269 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID[TIGR01124] threonine ammonia-lyase, biosynthetic, long form 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACT CGCAACCCCT GTCCGGTGCC CCGGAAGGTG CTGAATATTT AAGAGCGGTG 
CTGCGCGCGC CGGTCTACGA AGCGGCGCAG GTCACGCCGC TACAAAAAAT GGAAAAGCTC
TCGTCTCGTC TTGATAACGT GATTCTGGTG AAGCGCGAAG ATCGCCAGCC AGTGCACAGC
TTTAAGCTGC GCGGCGCATA CGCCATGATG GCGGGCCTGA CGGAAGAACA AAAAGCGCAC
GGCGTGATCA CTGCTTCTGC GGGTAACCAC GCGCAGGGCG TCGCGTTTTC TTCTGCGCGG
TTAGGCGTGA AGGCCCTGAT CGTTATGCCA ACCGCCACCG CCGACATCAA AGTCGACGCG
GTGCGCGGCT TCGGCGGCGA AGTGCTGCTC CACGGCGCGA ACTTTGATGA AGCGAAAGCC
AAAGCGATCG AACTGTCACA GCAGCAGGGG TTCACCTGGG TGCCGCCGTT CGACCATCCG
ATGGTGATTG CCGGGCAAGG CACGCTGGCG CTGGAACTGC TCCAGCAGGA CGCCCATCTC
GACCGCGTAT TTGTGCCAGT CGGCGGCGGC GGTCTGGCTG CTGGCGTGGC GGTGCTGATC
AAACAACTGA TGCCGCAAAT CAAAGTAATC GCCGTAGAAG CGGAAGACTC CGCCTGCCTG
AAAGCAGCGC TGGATGCGGG TCATCCGGTT GATCTGCCGC GCGTGGGGCT GTTTGCTGAA
GGCGTTGCGG TAAAACGCAT CGGCGACGAA ACCTTCCGTT TGTGCCAGGA GTATCTCGAC
GATATCATCA CCGTCGATAG TGATGCGATC TGTGCGGCGA TGAAGGATTT ATTCGAAGAT
GTGCGCGCGG TGGCGGAACC CTCTGGCGCG CTGGCGCTGG CGGGAATGAA AAAATATATC
GCCCAGCACA ACATTCGCGG CGAACGGCTG GCGCATATTC TTTCCGGTGC CAACGTGAAC
TTCCACGGCC TGCGCTACGT CTCGGAACGC TGCGAACTGG GCGAACAGCG TGAAGCGTTG
TTGGCGGTGA CCATTCCGGA AGAAAAAGGC AGCTTCCTCA AATTCTGCCA ACTGCTTGGC
GGGCGATCGG TCACCGAGTT CAACTACCGT TTTGCCGATG CCAAAAACGC CTGCATCTTT
GTCGGCGTGC GCCTGAGCCG CGGCCTCGAA GAGCGCAAAG AAATTTTGCA GATGCTCAAC
GACGGCGGCT ACAGCGTGGT GGATCTCTCC GACGACGAAA TGGCGAAGTT GCATGTGCGC
TATATGGTCG GCGGGCGTCC GTCACATCCG TTGCAGGAAC GCCTCTACAG CTTCGAATTC
CCGGAATCAC CGGGCGCGCT GCTGCGCTTC CTCAACACGC TGGGTACGCA CTGGAACATT
TCTTTGTTCC ACTATCGCAG CCATGGCACC GACTACGGGC GCGTACTGGC GGCGTTCGAA
CTTGGCGACC ATGAACCGGA TTTCGAAACC CGGCTGAATG AGCTGGGCTA CGATTGCCAC
GACGAAACCA ATAACCCGGC GTTCAGGTTC TTTTTGGCGG GTTAG
 
Protein sequence
MADSQPLSGA PEGAEYLRAV LRAPVYEAAQ VTPLQKMEKL SSRLDNVILV KREDRQPVHS 
FKLRGAYAMM AGLTEEQKAH GVITASAGNH AQGVAFSSAR LGVKALIVMP TATADIKVDA
VRGFGGEVLL HGANFDEAKA KAIELSQQQG FTWVPPFDHP MVIAGQGTLA LELLQQDAHL
DRVFVPVGGG GLAAGVAVLI KQLMPQIKVI AVEAEDSACL KAALDAGHPV DLPRVGLFAE
GVAVKRIGDE TFRLCQEYLD DIITVDSDAI CAAMKDLFED VRAVAEPSGA LALAGMKKYI
AQHNIRGERL AHILSGANVN FHGLRYVSER CELGEQREAL LAVTIPEEKG SFLKFCQLLG
GRSVTEFNYR FADAKNACIF VGVRLSRGLE ERKEILQMLN DGGYSVVDLS DDEMAKLHVR
YMVGGRPSHP LQERLYSFEF PESPGALLRF LNTLGTHWNI SLFHYRSHGT DYGRVLAAFE
LGDHEPDFET RLNELGYDCH DETNNPAFRF FLAG