| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5165 |
|---|
| Symbol | glmS |
|---|
| ID | 6971713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 4808379 |
|---|
| End bp | 4810208 |
|---|
| Gene Length | 1830 bp |
|---|
| Protein Length | 609 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643388831 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase |
|---|
| Protein accession | YP_002273257 |
|---|
| Protein GI | 209397586 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.212663 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGAA TTGTTGGCGC GATCGCGCAA CGTGATGTAG CAGAAATCCT TCTTGAAGGT
TTACGTCGTC TGGAATACCG CGGATATGAC TCTGCCGGTC TGGCCGTTGT TGATGCGGAA
GGTCATATGA CCCGCCTGCG TCGCCTCGGT AAAGTCCAGA TGCTGGCTCA GGCAGCGGAA
GAACATCCTC TGCATGGCGG CACCGGTATT GCTCACACTC GCTGGGCGAC CCACGGTGAA
CCTTCAGAAG TGAATGCGCA TCCGCATGTT TCTGAACACA TTGTGGTGGT GCATAACGGC
ATCATCGAAA ACCATGAACC GCTGCGCGAA GAGTTAAAAG CGCGTGGCTA TACCTTCGTT
TCTGAAACCG ACACCGAAGT GATTGCCCAT CTGGTGAACT GGGAGCTGAA ACAGGGCGGT
ACTCTGCGTG AGGCTGTTCT GCGTGCTATC CCGCAACTGC GTGGTGCGTA CGGTACAGTG
ATCATGGACT CCCGTCACCC GGATACCCTG CTGGCAGCAC GTTCTGGTAG TCCGCTGGTG
ATTGGTCTGG GTATGGGTGA AAACTTTATC GCTTCTGACC AGCTGGCGCT GCTGCCGGTG
ACCCGTCGCT TTATCTTCCT TGAAGAGGGC GATATTGCGG AAATCACTCG CCGTTCGGTA
AACATCTTCG ATAAAACTGG CGCGGAAGTA AAACGTCAGG ATATCGAATC CAATCTGCAA
TATGACGCGG GCGATAAAGG TATTTACCGT CACTACATGC AGAAAGAGAT CTACGAACAG
CCGAACGCGA TCAAAAACAC CCTTACCGGG CGCATCAGCC ACGGTCAGGT TGATTTAAGC
GAGCTGGGAC CGAACGCCGA CGAACTGCTG TCGAAGGTTG AGCATATTCA GATCCTCGCC
TGTGGTACTT CTTATAACTC CGGTATGGTT TCCCGTTACT GGTTTGAATC GCTGGCAGGT
ATTCCGTGCG ACGTCGAAAT CGCCTCTGAA TTCCGCTATC GTAAATCTGC CGTGCGTCGT
AACAGCCTGA TGATCACCTT GTCACAGTCT GGCGAAACCG CGGATACCCT GGCGGGCCTG
CGTCTGTCGA AAGAGCTGGG TTACCTTGGT TCGCTGGCAA TCTGTAACGT TCCGGGTTCT
TCTCTGGTGC GCGAATCCGA TCTGGCGCTG ATGACCAACG CGGGTACGGA AATCGGCGTG
GCATCCACTA AAGCATTCAC CACTCAGTTA ACTGTGCTGT TGATGCTGGT GGCGAAGCTG
TCTCGCCTGA AAGGTCTGGA TGCCTCCATT GAACATGACA TTGTGCATGG TCTGCAGGCG
CTGCCGAGCC GTATTGAGCA GATGCTGTCT CAGGACAAAC GCATTGAAGC TCTGGCAGAA
GATTTCTCTG ACAAACATCA CGCGCTGTTC CTGGGCCGTG GCGATCAGTA CCCAATCGCG
CTGGAAGGCG CATTGAAGCT GAAAGAGATC TCTTATATTC ACGCTGAAGC CTACGCTGCA
GGCGAACTGA AACACGGTCC GCTGGCGCTG ATTGACGCCG ATATGCCGGT TATCGTCGTT
GCGCCGAACA ACGAATTGCT GGAAAAACTG AAATCCAACA TTGAAGAAGT TCGCGCGCGT
GGCGGCCAAT TGTATGTTTT CGCCGAGCAG GATGCGGGTT TTGTAAGTAG CGATAACATG
CACATCATCG AGATGCCGCA TGTGGAAGAG GTGATTGCAC CGATCTTCTA CACCGTTCCG
CTGCAGTTAC TGGCTTATCA CGTCGCGCTG ATCAAAGGCA CCGACGTTGA CCAGCCGCGT
AACCTGGCAA AATCGGTAAC GGTTGAGTAA
|
|---|
| Protein sequence | MCGIVGAIAQ RDVAEILLEG LRRLEYRGYD SAGLAVVDAE GHMTRLRRLG KVQMLAQAAE
EHPLHGGTGI AHTRWATHGE PSEVNAHPHV SEHIVVVHNG IIENHEPLRE ELKARGYTFV
SETDTEVIAH LVNWELKQGG TLREAVLRAI PQLRGAYGTV IMDSRHPDTL LAARSGSPLV
IGLGMGENFI ASDQLALLPV TRRFIFLEEG DIAEITRRSV NIFDKTGAEV KRQDIESNLQ
YDAGDKGIYR HYMQKEIYEQ PNAIKNTLTG RISHGQVDLS ELGPNADELL SKVEHIQILA
CGTSYNSGMV SRYWFESLAG IPCDVEIASE FRYRKSAVRR NSLMITLSQS GETADTLAGL
RLSKELGYLG SLAICNVPGS SLVRESDLAL MTNAGTEIGV ASTKAFTTQL TVLLMLVAKL
SRLKGLDASI EHDIVHGLQA LPSRIEQMLS QDKRIEALAE DFSDKHHALF LGRGDQYPIA
LEGALKLKEI SYIHAEAYAA GELKHGPLAL IDADMPVIVV APNNELLEKL KSNIEEVRAR
GGQLYVFAEQ DAGFVSSDNM HIIEMPHVEE VIAPIFYTVP LQLLAYHVAL IKGTDVDQPR
NLAKSVTVE
|
|---|
| |