Gene ECH74115_5142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5142 
Symbol 
ID6966557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4784569 
End bp4785528 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content52% 
IMG OID643388813 
ProductDNA-binding transcriptional regulator YidZ 
Protein accessionYP_002273239 
Protein GI209397765 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.276657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT CCATCACCAC GCTTGATCTC AATCTGCTGC TCTGTCTGCA GCTGCTGATG 
CAGGAGCGCA GCGTAACCAA AGCGGCGAAG CGGATGAACG TGACACCTTC GGCGGTGAGT
AAGTCGCTGG CAAAGTTAAG AGCGTGGTTT GACGACCCGC TCTTTGTGAA CTCACCGTTG
GGGCTGTCGC CCACACCGCT AATGGTCAGC ATGGAGCAAA ATCTGGCGGA GTGGATGCAA
ATGAGCAACC TGCTGCTGGA TAAACCGCAC CACCAGACAC CGCGCGGCCT GAAGTTTGAG
CTGGCGGCAG AATCACCGCT AATGATGATC ATGCTTAATG CGCTGTCGAA ACAGATCTAC
CAACGTTACC CGCAGGCGAC CATCAAATTA CGTAACTGGG ATTACGATTC CTTAGATGCC
ATTACTCGTG GTGAAGTGGA TATCGGTTTT TCCGGTCGCG AAAGTCATCC CCGTTCGCGG
GAGCTGTTAA GCTCGCTACC GTTAGCCATT GATTATGAAG TGTTGTTTAG TGATGTGCCC
TGCGTCTGGT TACGCAAAGA TCATCCGGCA CTGCATGAAA AGTGGGATCT CGATACCTTT
TTACGTTATC CGCATATCAG CATTTGCTGG GAACAGAGCG ATACCTGGGC GCTGGACAAT
GTGTTACAGG AGCTGGGGCG CGAACGTACG ATTGCAATGA GCCTGCCGGA ATTCGAGCAG
TCACTGTTTA TGGCAGCGCA GCCCGACAAT CTGCTCCTGG CGACCGCGCC GCGCTACTGT
CAGTACTACA ATCAACTCCA CCAACTGCCG TTGGTTGCTC TTCCTCTCCC GTTTGACGAA
AGCCAGCAAA AAAAGCTGGA AGTCCCTTTT ACCCTGCTGT GGCATAAACG GAACAGCCAT
AATCCGAAGA TCGTCTGGTT ACGGGATACC ATTAAAAATC TTTACGCGTC GATGGCATAA
 
Protein sequence
MKKSITTLDL NLLLCLQLLM QERSVTKAAK RMNVTPSAVS KSLAKLRAWF DDPLFVNSPL 
GLSPTPLMVS MEQNLAEWMQ MSNLLLDKPH HQTPRGLKFE LAAESPLMMI MLNALSKQIY
QRYPQATIKL RNWDYDSLDA ITRGEVDIGF SGRESHPRSR ELLSSLPLAI DYEVLFSDVP
CVWLRKDHPA LHEKWDLDTF LRYPHISICW EQSDTWALDN VLQELGRERT IAMSLPEFEQ
SLFMAAQPDN LLLATAPRYC QYYNQLHQLP LVALPLPFDE SQQKKLEVPF TLLWHKRNSH
NPKIVWLRDT IKNLYASMA