Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5140 |
Symbol | tnaB |
ID | 6968487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4782040 |
End bp | 4783287 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643388811 |
Product | tryptophan permease TnaB |
Protein accession | YP_002273237 |
Protein GI | 209399599 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.406172 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATC AAGCTGAAAA AAAGCACTCT GCATTTTGGG GTGTTATGGT TATAGCAGGT ACAGTAATCG GTGGAGGTAT GTTTGCTTTA CCTGTGGATC TTGCCGGTGC CTGGTTTTTC TGGGGTGCCT TTATCCTTAT CATTGCCTGG TTTTCAATGC TTCATTCCGG GTTATTGTTA TTAGAAGCAA ATTTAAATTA TCCCGTCGGC TCCAGTTTTA ACACCATCAC CAAAGATTTA ATCGGTAACA CCTGGAACAT TATCAGCGGT ATTACCGTTG CCTTCGTTCT CTATATCCTC ACTTATGCCT ATATCTCTGC TAATGGTGCG ATCATTAGTG AAACGATATC AATGAATTTG GGTTATCACG CTAATCCACG TATTGTCGGG ATCTGCACAG CCATTTTCGT TGCCAGCGTA TTGTGGATAA GCTCGTTAGC CGCCAGTCGT ATTACCTCAT TGTTCCTCGG GCTGAAGATT ATCTCCTTTG TGATCGTGTT TGGTTCTTTC TTCTTCCTGG TCGATTACTC CATTCTGCGC GATGCCACCA GCTCCACTGC GGGAACGTCT TACTTCCCGT ATATCTTTAT GGCTTTGCCG GTGTGTCTGG CGTCATTTGG TTTCCACGGC AATATTCCCA GCCTGATTAT TTGCTATGGC AAACGCAAAG ATAAGCTAAT CAAAAGCGTG GTCTTCGGTT CGCTGCTGGC GCTGGTGATT TATCTCTTCT GGCTCTATTG CACCATGGGG AATATTCCGC GAGAAAGCTT TAAGGCGATT ATTTCCTCAG GCGGCAACGT TGATTCACTG GTGAAATCGT TCCTCGGCAC CAAACAGCAC GGCATTATCG AGTTTTGCCT GCTGGTGTTC TCCAACTTAG CTGTCGCCAG CTCGTTTTTT GGTGTCACGC TGGGATTGTT CGATTATCTG GCGGACCTGT TTAAGATTGA TAACTCCCAC GGCGGGCGTT TCAAAACCGT GCTGTTAACC TTCCTGCCAC CCGCGTTGTT GTATCTGATC TTCCCGAACG GCTTTATTTA CGGGATCGGC GGTGCCGGAC TGTGCGCCAC TATTTGGGCG GTCATTATTC CCGCAGTGCT GGCAATCAAA GCTCGCAAAA AGTTTCCCAA TCAGATGTTC ACGGTCTGGG GCGGCAATCT TATTCCGGCG ATTGTCATTC TCTTTGGTAT AACCGTAATT TTGTGCTGGT TCGGCAACGT CTTTAACGTG TTACCTAAAT TTGGCTAA
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Protein sequence | MTDQAEKKHS AFWGVMVIAG TVIGGGMFAL PVDLAGAWFF WGAFILIIAW FSMLHSGLLL LEANLNYPVG SSFNTITKDL IGNTWNIISG ITVAFVLYIL TYAYISANGA IISETISMNL GYHANPRIVG ICTAIFVASV LWISSLAASR ITSLFLGLKI ISFVIVFGSF FFLVDYSILR DATSSTAGTS YFPYIFMALP VCLASFGFHG NIPSLIICYG KRKDKLIKSV VFGSLLALVI YLFWLYCTMG NIPRESFKAI ISSGGNVDSL VKSFLGTKQH GIIEFCLLVF SNLAVASSFF GVTLGLFDYL ADLFKIDNSH GGRFKTVLLT FLPPALLYLI FPNGFIYGIG GAGLCATIWA VIIPAVLAIK ARKKFPNQMF TVWGGNLIPA IVILFGITVI LCWFGNVFNV LPKFG
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