Gene ECH74115_5138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5138 
Symbol 
ID6969763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4777860 
End bp4779848 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content36% 
IMG OID643388809 
ProductShET2 enterotoxin, N- region family 
Protein accessionYP_002273235 
Protein GI209400950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.103144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.23823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGATA ACGTAACTGT TAGCAGAGTA TGTATACAAT CTCCTTCTTT CGTGCCTGAT 
TTGGATGGAG AAAAAAATAA ATCTCAATTA TTCGTTGACG ATATAGTTGC GTATCTTAAA
AGTCCTTCAG TTTATTCACT TGAAAAAGAG GGGCCGTTAA ATCATTTTGT TAATCATTGT
TCTGAAGTTG AGTTAGGTTT CTATAGCGAT GGTGCATATT CAATTCTTGT CTCCAGATCT
AAGCAACAAC CTGAAGGTAT GATTTTAACC GTAAGCGATG CAGACGCAAT CAATATAGTA
CATATTTCCG TATCTCCAGT GCTTATAAAA TTCCTGGATG ATATTTTTAC TTGCCTTCAT
ACGTACCCTG ATGATGAGAG TTTTACAAAA GAGCAGATAA AAGCTAATAG CAAATATGAT
ATTGTAGATT ATAATTGCCT GTTGCATTTT ACTGGAAAAC CAAAAAGTTT AATAGAATGT
AGACATTTTG CTCTGCAATA CTGTATAGAT TCAATGAATG AGCATACAGG GAAAGTTCCA
TTAAAGGCTT ACTATTCATC TCCGGAAGAT ATACAAAAAC ATATTCCTTT CGAGCTTGAG
CAGCAATTTA ACAATCTACA AAAAAATCCA CCACCCGGTA CATGCGTCGT TGCCAGTGAT
AAGTTTGGGG AGGCATTATC TGTCTTTTTT CACAGAATGG AAAAAGAGAA GTTAACGCAT
ATGACGGCAA TCGTTCAATC TCAAACACAC GCTATGGCCG TCCGCTTGAG GATCAAAAAA
ACGCCTGCTG GTGAAACAGA ATATGTTGTA TCCTTTTATG ATCCTAATGC AACCAATACT
GCAGTACGCT ATAAAGCAAA CAACTGTGAT TCTTTTGGGT CATTGCAATC GTTTATAAAT
ATTCAACAGG CAAAACAAAA ATGGGTAATA ACAGATATTT GCTCCGAGTG TGTAGGAATA
ACCCCTTATC TCCCTCGGGA ACAAGCCCAT TTATTAAGTG GTATTGAAAA TGAGTTGCAA
CCTCCATTAT CACCACCAGC ATTATTTCTA TTAATGAGAA TGGGGATATA TAAAAACATT
GTTCTTTTTT TCGATAAATT AAAAAACTCT CAAGAAATGA CAGCATCAAA GGCTCTTGAT
ATTCTTGCTG CGAAATCACC TGAAGGAATA TATGGGTTAT GTGTATTATT GTATCACAAT
ACTATTGATA AGTTTAATGA TTACATAACA AATTTAAAAG AGTTGACCAG AAAATATAAT
TTTAGCCAAG AGGACCTGGA AACTCTACTC CTTGCGAAAG ATAATCTCGG AGTGAGCTGG
ATTCCCAGGG CTTTGAAAAA TAATCAAAAT AAAATTGTCA AAGCATGGTT GTTGGCGATA
GATGACTTTG AGAAAGAATT TGGGGTAAAT AAAAATGAAA TACTTCTTCG TATAGGAAAG
GAAATAGACT CAATTGATGA TTTAAATAGC GCTATTAGAA CCAATGATTA TAATGTTGTT
AATATATTGC TAGCCAATAT AAAAGCCAAA ATGTTTAAAA ATGAATTAAA TAAAGAAGAT
ATATTGAAAC TGATGGCAGC AAGAGAAAAA GTGGCGGGAG CATCAGACAA ATGGACGAAG
GCATCAGGCT TATATTCTGC GATAGTGAAA GGGCATACGA AGATTGTTGC TGCCTGGATG
GAGACAGCTG AAGTGATAGC CAGCCATTAT GAAAATGATA AAGATGTAGT GAGAGAACTC
CTGTCGCTGA GCAGAAATAA TGCAGTTTGC TCTTTGTATG TTGCCAGCTA TAAGACAATG
AGTAAGCAGG TCATTGATGT ATATCTGAAT GCGGCGATTC GCCTGGCGTT GCAACACGGG
TTCACTTTCG ATGAGATTTT GGAGCAGTTT ACCCGTGACT TTGATGGGAA GTCATTCTCT
CTTGCGGTAG AGAAAGCGGA TGATATATAT GGGTCTCTGG CTGAAAATAT TCAAAATTGT
GGTTGGTGA
 
Protein sequence
MVDNVTVSRV CIQSPSFVPD LDGEKNKSQL FVDDIVAYLK SPSVYSLEKE GPLNHFVNHC 
SEVELGFYSD GAYSILVSRS KQQPEGMILT VSDADAINIV HISVSPVLIK FLDDIFTCLH
TYPDDESFTK EQIKANSKYD IVDYNCLLHF TGKPKSLIEC RHFALQYCID SMNEHTGKVP
LKAYYSSPED IQKHIPFELE QQFNNLQKNP PPGTCVVASD KFGEALSVFF HRMEKEKLTH
MTAIVQSQTH AMAVRLRIKK TPAGETEYVV SFYDPNATNT AVRYKANNCD SFGSLQSFIN
IQQAKQKWVI TDICSECVGI TPYLPREQAH LLSGIENELQ PPLSPPALFL LMRMGIYKNI
VLFFDKLKNS QEMTASKALD ILAAKSPEGI YGLCVLLYHN TIDKFNDYIT NLKELTRKYN
FSQEDLETLL LAKDNLGVSW IPRALKNNQN KIVKAWLLAI DDFEKEFGVN KNEILLRIGK
EIDSIDDLNS AIRTNDYNVV NILLANIKAK MFKNELNKED ILKLMAAREK VAGASDKWTK
ASGLYSAIVK GHTKIVAAWM ETAEVIASHY ENDKDVVREL LSLSRNNAVC SLYVASYKTM
SKQVIDVYLN AAIRLALQHG FTFDEILEQF TRDFDGKSFS LAVEKADDIY GSLAENIQNC
GW