| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5105 |
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| Symbol | emrD |
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| ID | 6967803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4747495 |
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| End bp | 4748685 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643388777 |
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| Product | multidrug resistance protein D |
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| Protein accession | YP_002273203 |
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| Protein GI | 209396441 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.336287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATAATGA AAAGGCATAG AAACATCAAT TTGTTATTGA TGTTGGTATT ACTCGTGGCC
GTCGGTCAGA TGGCGCAAAC CATTTATATT CCAGCTATTG CCGATATGGC GCGCGATCTC
AACGTTCGTG AAGGGGCGGT GCAGAGCGTA ATGGGCGCTT ATCTGCTGAC TTACGGTGTC
TCACAGCTGT TTTATGGCCC GATTTCCGAC CGTGTGGGTC GCCGACCGGT GATCCTCGTC
GGAATGTCCA TTTTTATGCT GGCAACGCTG GTCGCGGTCA CGACCTCCAG TTTGACAGTA
TTGATTGCCG CCAGCGCGAT GCAGGGGATG GGCACCGGCG TTGGCGGCGT AATGGCGCGT
ACTTTGCCGC GTGATTTATA TGAACGGACA CAGTTGCGCC ACGCTAACAG CCTGTTAAAC
ATGGGAATTC TTGTCAGTCC GTTGCTCGCA CCGCTAATCG GCGGTCTGCT GGATACGATG
TGGAACTGGC GCGCCTGTTA TCTCTTTTTG TTGGTACTTT GTGCCGGTGT GACCTTCAGT
ATGGCCCGCT GGATGCCGGA AACGCGTCCG GTCGACGCAC CGCGCACGCG CCTGCTTACC
AGTTATAAAA CGCTTTTCGG TAACAGCGGT TTTAACTGTT ATTTGCTGAT GCTGATTGGC
GGTCTGGCCG GGATTGCCGC CTTTGAAGCC TGCTCCGGCG TGCTGATGGG CGCGGTGTTA
GGGCTGAGCA GTATGACGGT CAGTATTTTG TTTATTCTGC CGATTCCGGC GGCATTTTTT
GGGGCATGGT TTGCCGGACG TCCTAATAAA CGCTTCTCAA CGTTGATGTG GCAGTCGGTT
ATCTGCTGCC TGCTGGCTGG CTTACTGATG TGGATCCCCG ACTGGTTTGG CGTGATGAAT
GTCTGGACGC TGCTCGTTCC CGCCGCGCTG TTCTTTTTCG GTGCCGGGAT GCTGTTTCCG
CTGGCGACCA GCGGCGCGAT GGAGCCGTTC CCTTTCCTGG CGGGCACGGC TGGCGCGCTG
GTCGGCGGTC TACAAAACAT TGGTTCCGGC GTGCTGGCGT CGCTCTCTGC GATGTTGCCG
CAAACCGGTC AGGGCAGCCT GGGGTTGTTG ATGACCTTAA TGGGATTGTT GATCGTGCTG
TGCTGGCTAC CGCTGGCGAC GCGGATGTCG CATCAGGGGC AGCCCGTTTA A
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| Protein sequence | MIMKRHRNIN LLLMLVLLVA VGQMAQTIYI PAIADMARDL NVREGAVQSV MGAYLLTYGV
SQLFYGPISD RVGRRPVILV GMSIFMLATL VAVTTSSLTV LIAASAMQGM GTGVGGVMAR
TLPRDLYERT QLRHANSLLN MGILVSPLLA PLIGGLLDTM WNWRACYLFL LVLCAGVTFS
MARWMPETRP VDAPRTRLLT SYKTLFGNSG FNCYLLMLIG GLAGIAAFEA CSGVLMGAVL
GLSSMTVSIL FILPIPAAFF GAWFAGRPNK RFSTLMWQSV ICCLLAGLLM WIPDWFGVMN
VWTLLVPAAL FFFGAGMLFP LATSGAMEPF PFLAGTAGAL VGGLQNIGSG VLASLSAMLP
QTGQGSLGLL MTLMGLLIVL CWLPLATRMS HQGQPV
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