| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5098 |
|---|
| Symbol | uhpB |
|---|
| ID | 6967523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 4738870 |
|---|
| End bp | 4740375 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643388773 |
|---|
| Product | sensory histidine kinase UhpB |
|---|
| Protein accession | YP_002273199 |
|---|
| Protein GI | 209397016 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3851] Signal transduction histidine kinase, glucose-6-phosphate specific |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.118457 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATGAAGA CGTTGTTCTC CCGCTTAATT ACCGTTATTG CCTGCTTTTT TATCTTCTCT
GCCGCATGGT TTTGCCTGTG GAGTATCAGC CTGCACCTGG TTGAGCGCCC TGATATGGCG
GTGCTGTTAT TTCCGTTTGG TCTGCGGCTA GGGCTAATGC TGCAATGCCC GCGCGGATAC
TGGCCGGTGC TGCTGGGAGC GGAGTGGCTG CTGATTTACT GGCTAACGCA GGCGGTCGGT
TTAACCCATT TCTCCTTATT GATGATCGGT AGTTTACTGA CGTTACTGCC CGTGGCGCTG
ATCTCGCGCT ATCGCCATCA ACGTGACTGG CGCACCTTGC TGTTACAGGG TGCGGCGTTA
ACGGCGGCGG CGTTGTTGCA GTCGCTGCCC TGGCTTTGGC ACGGCAAAGA GTCGTGGAAT
GCGCTGCTGT TAACTTTAAC TGGCGGCCTG ACGCTGGCCC CGATATGTCT GGTGTTCTGG
CATTATCTCG CCAATAACAC CTGGCTGCCG CTCGGGCCGT CGTTAGTTTC TCAACCGATC
AACTGGCGCG GGCGGCATCT GGTCTGGTAC TTGCTGCTGT TTGTTATCAG TCTCTGGCTC
CAGTTGGGCT TGCCGGACGA ACTGTCGCGC TTTACGCCAT TCTGCCTGGC GCTGCCGATT
ATCGCGCTGG CCTGGCACTA CGGCTGGCAA GGGGCGCTGA TAGCGACATT GATGAACGCC
ATCGCGCTGA TCGCCAGTCA AACCTGGCGC GATCATCCTG TGGATTTATT GCTCTCGCTG
CTGGTGCAAA GTCTGACAGG GTTGTTACTG GGCGCTGGCA TCCAGCGGTT GCGTGAACTT
AACCAGTCGC TGCAAAAGGA ACTGGCGCGC AATCAGCATC TCGCTGAACG TTTGTTAGAA
ACTGAAGAGA GCGTGCGCCG TGATGTGGCG CGTGAGCTGC ATGATGATAT CGGCCAGACC
ATCACTGCCA TTCGTACTCA AGCGGGCATT GTCCAGCGAC TGGCGGCAGA TAACGCCAGT
GTGAAGCAGA GCGGGCAGCT CATCGAACAA CTGTCGCTGG GCGTGTACGA CGCGGTGCGC
CGTTTGTTAG GGCGGTTACG TCCGCGCCAG TTGGATGATC TCACCCTAGA GCAGGCCATC
CGCTCACTGA TGCGGGAAAT GGAGCTGGAA GGGCGCGGCA TTGTCAGCCA TCTCGAATGG
CGAATCGAAG AGTCAGCGTT AAGCGAAAAC CAGCGCGTGA CGCTGTTTCG TGTCTGCCAG
GAAGGGCTGA ATAACATTGT GAAACATGCT GATGCCAGCG CGGTCACCCT GCAAGGCTGG
CTGCAGGATG AACGGTTGAT GCTGGTGATT GAAGACGATG GCAGCGGTTT ACCGCCGGGT
TCCGGGCAAC AAGGTTTTGG CCTCACCGGA ATGCGCGAGC GCGTAACGGC GCTGGGCGGC
ACCTTGACCA TTTCCTGTCT GCACGGCACG CGTGTCAGCG TTTCTCTACC TCAACGCTAT
GTCTAA
|
|---|
| Protein sequence | MMKTLFSRLI TVIACFFIFS AAWFCLWSIS LHLVERPDMA VLLFPFGLRL GLMLQCPRGY
WPVLLGAEWL LIYWLTQAVG LTHFSLLMIG SLLTLLPVAL ISRYRHQRDW RTLLLQGAAL
TAAALLQSLP WLWHGKESWN ALLLTLTGGL TLAPICLVFW HYLANNTWLP LGPSLVSQPI
NWRGRHLVWY LLLFVISLWL QLGLPDELSR FTPFCLALPI IALAWHYGWQ GALIATLMNA
IALIASQTWR DHPVDLLLSL LVQSLTGLLL GAGIQRLREL NQSLQKELAR NQHLAERLLE
TEESVRRDVA RELHDDIGQT ITAIRTQAGI VQRLAADNAS VKQSGQLIEQ LSLGVYDAVR
RLLGRLRPRQ LDDLTLEQAI RSLMREMELE GRGIVSHLEW RIEESALSEN QRVTLFRVCQ
EGLNNIVKHA DASAVTLQGW LQDERLMLVI EDDGSGLPPG SGQQGFGLTG MRERVTALGG
TLTISCLHGT RVSVSLPQRY V
|
|---|
| |