| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5066 |
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| Symbol | |
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| ID | 6970730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4713447 |
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| End bp | 4714019 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643388744 |
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| Product | type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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| Protein accession | YP_002273170 |
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| Protein GI | 209399518 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.164544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAC ACATTAAAAA CCTTTTTTTA TTGGCTGCTA TTTGTTTGAC AGTGGCATGT
AAAGAGCAAT TGTATACAGG ATTAACAGAA AAAGAAGCTA ATCAGATGCA AGCACTGTTG
CTATCCAATG ATGTCAATGT TTCCAAAGAA ATGGACAAAA GTGGAAATAT GACACTCAGT
GTGGAAAAAG AGGATTTTGT TCGCGCAATA ACGATTTTAA ATAATAACGG CTTCCCGAAA
AAGAAATTTG CAGATATCGA GGTTATTTTC CCACCTAGCC AGTTAGTGGC ATCGCCATCA
CAAGAAAATG CAAAAATCAA CTATCTCAAA GAACAAGACA TCGAAAGGTT GCTAAGTAAA
ATACCTGGTG TTATCGATTG CAGCGTTTCA TTAAATGTTA ACAATAACGA AAGTCAACCC
TCCTCAGCAG CCGTTTTAGT CATCAGCTCG CCAGAGGTTA ACTTAGCACC ATCGGTCATT
CAGATAAAAA ACCTAGTTAA GAATAGTGTT GACGATCTCA AATTAGAAAA TATTAGTGTT
GTTATCAAGT CATCCTCAGG ACAGGACGGG TAA
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| Protein sequence | MKKHIKNLFL LAAICLTVAC KEQLYTGLTE KEANQMQALL LSNDVNVSKE MDKSGNMTLS
VEKEDFVRAI TILNNNGFPK KKFADIEVIF PPSQLVASPS QENAKINYLK EQDIERLLSK
IPGVIDCSVS LNVNNNESQP SSAAVLVISS PEVNLAPSVI QIKNLVKNSV DDLKLENISV
VIKSSSGQDG
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