| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5060 |
|---|
| Symbol | |
|---|
| ID | 6969820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 4707129 |
|---|
| End bp | 4708046 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643388738 |
|---|
| Product | SepQ |
|---|
| Protein accession | YP_002273164 |
|---|
| Protein GI | 209400927 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCAT TGAGTTCACA ATTGAATATG AAAATTAACG ATTTTTATTT GCCGTTGTTG
CCAGTTATCG GAACCGGTCG CCTCTATATT ACGTCCAAAG GTCATGCTTG CCATGCATAT
TTTCGTGAGG TCAGCGGTCA TGGTATTCGT TTCACGTTGA CATACTCGGG CTATGAGGGG
CGTTTCTGGA TATCAGAAGA ACAGTTCATT CAGTGGTGCC AAGAGTTATT CCCGTATAGC
GAAAGCCGGC TGATACCGGA AGATACGATA AAACTCATGA TCTTATGGGT AATGCAGACT
GCCTTACCGG AAGGTGATGT GTCAGTTGAT GATGTTCAAT TTACGATGCT AAATAAAGAT
ATTTATCCGG TAATAGAAAA TAATAATGGA GAAAACAGAC TTAATGTAAT TATACTCGAA
ACAACGGTAC AAAGTTTACA ATATCTGATT AATGATAATT GGCAATTAGT TCCACATTCT
AATGCTCTTT TTTTTGATGG CTATATCGTA CCTGGGTGGA CTGATTATCC AGTTACAGAG
TTGAGAGTTG GTGATAGTCT GAGACTCTAT CATGTTGATG ATAGTCAAGA GAGAAGGTGC
TGGATTGTTA TTAATACCCC TTTAGCAACA GTAAATCTGA GTGATAATAA TTTATCTGTC
ACGGATGTTC TGGCTGCGGA TCTGTTATCT GCTCTTAGCA ATGAGACTGT CATGAATCGC
ATTTATTGTG CGATCGGTAC AGTCCATATT GATATACACA TGTTGCGTAA TGTTAAAAAA
GATGACATTA TTAATTCAGA TGGATACCAT CTTTTTGGTG GTTGTCAGTT AATACGCAAT
AATACGACGA TAGCATACGG GAGTATTGTA AAAATCAACG AAGATTTTTA TTTTACTGTT
AGCATAGTAT GTGATTAA
|
|---|
| Protein sequence | MKPLSSQLNM KINDFYLPLL PVIGTGRLYI TSKGHACHAY FREVSGHGIR FTLTYSGYEG
RFWISEEQFI QWCQELFPYS ESRLIPEDTI KLMILWVMQT ALPEGDVSVD DVQFTMLNKD
IYPVIENNNG ENRLNVIILE TTVQSLQYLI NDNWQLVPHS NALFFDGYIV PGWTDYPVTE
LRVGDSLRLY HVDDSQERRC WIVINTPLAT VNLSDNNLSV TDVLAADLLS ALSNETVMNR
IYCAIGTVHI DIHMLRNVKK DDIINSDGYH LFGGCQLIRN NTTIAYGSIV KINEDFYFTV
SIVCD
|
|---|
| |