| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5054 |
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| Symbol | |
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| ID | 6970294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4699562 |
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| End bp | 4702366 |
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| Gene Length | 2805 bp |
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| Protein Length | 934 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643388732 |
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| Product | intimin C-type lectin domain protein |
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| Protein accession | YP_002273158 |
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| Protein GI | 209398935 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACTC ATGGTTGTTA TACCCGGACC CGGCACAAGC ATAAGCTAAA AAAAACATTG
ATTATGCTTA GTGCTGGTTT AGGATTGTTT TTTTATGTTA ATCAGAATTC ATTTGCAAAT
GGTGAAAATT ATTTTAAATT GGGTTCGGAT TCAAAACTGT TAACTCATGA TAGCTATCAG
AATCGCCTTT TTTATACGTT GAAAACTGGT GAAACTGTTG CCGATCTTTC TAAATCGCAA
GATATTAATT TATCGACGAT TTGGTCGTTG AATAAGCATT TATACAGTTC TGAAAGCGAA
ATGATGAAGG CCGCGCCTGG TCAGCAGATC ATTTTGCCAC TCAAAAAACT TCCCTTTGAA
TACAGTGCAC TACCACTTTT AGGTTCGGCA CCTCTTGTTG CTGCAGGTGG TGTTGCTGGT
CACACGAATA AACTGACTAA AATGTCCCCG GACGTGACCA AAAGCAACAT GACCGATGAC
AAGGCATTAA ATTATGCGGC ACAACAGGCG GCGAGTCTCG GTAGCCAGCT TCAGTCGCGA
TCTCTGAACG GCGATTACGC GAAAGATACC GCTCTTGGTA TCGCTGGTAA CCAGGCTTCG
TCACAGTTGC AGGCCTGGTT ACAACATTAT GGAACGGCAG AGGTTAATCT GCAGAGTGGT
AATAACTTTG ACGGTAGTTC ACTGGACTTC TTATTACCGT TCTATGATTC CGAAAAAATG
CTGGCATTTG GTCAGGTCGG AGCGCGTTAC ATTGACTCCC GCTTTACGGC AAATTTAGGT
GCGGGTCAGC GTTTTTTCCT TCCTGCAAAC ATGTTGGGCT ATAACGTCTT CATTGATCAG
GATTTTTCTG GTGATAATAC CCGTTTAGGT ATTGGTGGCG AATACTGGCG AGACTATTTC
AAAAGTAGCG TTAACGGCTA TTTCCGCATG AGCGGCTGGC ATGAGTCATA CAATAAGAAA
GACTATGATG AGCGCCCAGC AAATGGCTTC GATATCCGTT TTAATGGCTA TCTACCGTCA
TATCCGGCAT TAGGCGCCAA GCTGATATAT GAGCAGTATT ATGGTGATAA TGTTGCTTTG
TTTAATTCTG ATAAGCTGCA GTCGAATCCT GGTGCGGCGA CCGTTGGTGT AAACTATACT
CCGATTCCTC TGGTGACGAT GGGGATCGAT TACCGTCATG GTACGGGTAA TGAAAATGAT
CTCCTTTACT CAATGCAGTT CCGTTATCAG TTTGATAAAT CGTGGTCTCA GCAAATTGAA
CCACAGTATG TTAACGAGTT AAGAACATTA TCAGGCAGCC GTTACGATCT GGTTCAGCGT
AATAACAATA TTATTCTGGA GTACAAGAAG CAGGATATTC TTTCTCTGAA TATTCCGCAT
GATATTAATG GTACTGAACA CAGTACGCAG AAGATTCAGT TGATCGTTAA GAGCAAATAC
GGTCTGGATC GTATCGTCTG GGATGATAGT GCATTACGCA GTCAGGGCGG TCAGATTCAG
CATAGCGGAA GCCAAAGCGC ACAAGACTAC CAGGCTATTT TGCCTGCTTA TGTGCAAGGT
GGCAGCAATA TTTATAAAGT GACGGCTCGC GCCTATGACC GTAATGGCAA TAGCTCTAAC
AATGTACAGC TTACTATTAC CGTTCTGTCG AATGGTCAAG TTGTCGACCA GGTTGGGGTA
ACGGACTTTA CGGCGGATAA GACTTCGGCT AAAGCGGATA ACGCCGATAC CATTACTTAT
ACCGCGACGG TGAAAAAGAA TGGGGTAGCT CAGGCTAATG TCCCTGTTTC ATTTAATATT
GTTTCAGGAA CTGCAACTCT TGGGGCAAAT AGTGCCAAAA CGGATGCTAA CGGTAAGGCA
ACCGTAACGT TGAAGTCGAG TACGCCAGGA CAGGTCGTCG TGTCTGCTAA AACCGCGGAG
ATGACTTCAG CACTTAATGC CAGTGCGGTT ATATTTTTTG ATCAAACCAA GGCCAGCATT
ACTGAGATTA AGGCTGATAA GACAACTGCA GTAGCAAATG GTAAGGATGC TATTAAATAT
ACTGTAAAAG TTATGAAAAA CGGTCAGCCA GTTAATAATC AATCCGTTAC ATTCTCAACA
AACTTTGGGA TGTTCAACGG TAAGTCTCAA ACGCAAGCAA CCACGGGAAA TGATGGTCGT
GCGACGATAA CACTAACTTC CAGTTCCGCC GGTAAAGCGA CTGTTAGTGC GACAGTCAGT
GATGGGGCTG AGGTTAAAGC GACTGAGGTC ACTTTTTTTG ATGAACTGAA AATTGACAAC
AAGGTTGATA TTATTGGTAA CAATGTCAGA GGCGAGTTGC CTAATATTTG GCTGCAATAT
GGTCAGTTTA AACTGAAAGC AAGCGGTGGT GATGGTACAT ATTCATGGTA TTCAGAAAAT
ACCAGTATCG CGACTGTCGA TGCATCAGGG AAAGTCACTT TGAATGGTAA AGGCAGTGTC
GTAATTAAAG CCACATCTGG TGATAAGCAA ACAGTAAGTT ACACTATAAA AGCACCGTCG
TATATGATAA AAGTGGATAA GCAAGCCTAT TATGCTGATG CTATGTCCAT TTGCAAAAAT
TTATTACCAT CCACACAGAC GGTATTGTCA GATATTTATG ACTCATGGGG GGCTGCAAAT
AAATATAGCC ATTATAGTTC TATGAACTCA ATAACTGCTT GGATTAAACA GACATCTAGT
GAGCAGCGTT CTGGAGTATC AAGCACTTAT AACCTAATAA CACAAAACCC TCTTCCTGGG
GTTAATGTTA ATACTCCAAA TGTCTATGCG GTTTGTGTAG AATAA
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| Protein sequence | MITHGCYTRT RHKHKLKKTL IMLSAGLGLF FYVNQNSFAN GENYFKLGSD SKLLTHDSYQ
NRLFYTLKTG ETVADLSKSQ DINLSTIWSL NKHLYSSESE MMKAAPGQQI ILPLKKLPFE
YSALPLLGSA PLVAAGGVAG HTNKLTKMSP DVTKSNMTDD KALNYAAQQA ASLGSQLQSR
SLNGDYAKDT ALGIAGNQAS SQLQAWLQHY GTAEVNLQSG NNFDGSSLDF LLPFYDSEKM
LAFGQVGARY IDSRFTANLG AGQRFFLPAN MLGYNVFIDQ DFSGDNTRLG IGGEYWRDYF
KSSVNGYFRM SGWHESYNKK DYDERPANGF DIRFNGYLPS YPALGAKLIY EQYYGDNVAL
FNSDKLQSNP GAATVGVNYT PIPLVTMGID YRHGTGNEND LLYSMQFRYQ FDKSWSQQIE
PQYVNELRTL SGSRYDLVQR NNNIILEYKK QDILSLNIPH DINGTEHSTQ KIQLIVKSKY
GLDRIVWDDS ALRSQGGQIQ HSGSQSAQDY QAILPAYVQG GSNIYKVTAR AYDRNGNSSN
NVQLTITVLS NGQVVDQVGV TDFTADKTSA KADNADTITY TATVKKNGVA QANVPVSFNI
VSGTATLGAN SAKTDANGKA TVTLKSSTPG QVVVSAKTAE MTSALNASAV IFFDQTKASI
TEIKADKTTA VANGKDAIKY TVKVMKNGQP VNNQSVTFST NFGMFNGKSQ TQATTGNDGR
ATITLTSSSA GKATVSATVS DGAEVKATEV TFFDELKIDN KVDIIGNNVR GELPNIWLQY
GQFKLKASGG DGTYSWYSEN TSIATVDASG KVTLNGKGSV VIKATSGDKQ TVSYTIKAPS
YMIKVDKQAY YADAMSICKN LLPSTQTVLS DIYDSWGAAN KYSHYSSMNS ITAWIKQTSS
EQRSGVSSTY NLITQNPLPG VNVNTPNVYA VCVE
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