Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5029 |
Symbol | yicI |
ID | 6967102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 4679870 |
End bp | 4682188 |
Gene Length | 2319 bp |
Protein Length | 772 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643388710 |
Product | alpha-xylosidase YicI |
Protein accession | YP_002273137 |
Protein GI | 209396989 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTA GCGACGGAAA CTGGTTGATT CAACCTGGCC TCAATTTGAT TCACCCGCTT CAGGTGTTCG AGGTTGAACA GCAGGGTAAT GAAATGGTGG TCTATGCTGC CCCCCGTGAT GTGCGTGAAC GAACCTGGCA GCTTGATACG CCTTTATTTA CGCTGCGCTT TTTCTCCCCA CAGGAAGGTA TTGTCGGTGT ACGGATTGAG CATTTTCAGG GGGCGCTGAA TAACGGTCCT CATTATCCGC TCAATATTTT GCAGGACGTG AAGGTCACAA TCGAAAACAC AGAACGTTAC GCTGAGTTTA AAAGTGGCAA CTTAAGCGCG CGTGTCAGCA AAGGTGAGTT CTGGTCACTG GATTTTCTGC GCAACGGCGA ACGTATTACC GGTAGTCAGG TGAAAAATAA TGGCTACGTG CAGGACACGA ATAATCAACG AAATTATATG TTTGAGCGGC TGGATCTTGG CGTTGGCGAA ACAGTTTACG GTCTGGGAGA GCGCTTTACT GCCCTGGTGC GCAATGGCCA GACGGTAGAG ACCTGGAACC GGGACGGCGG CACAAGTACT GAACAGGCGT ATAAAAATAT CCCGTTCTAT ATGACTAACC GTGGCTATGG GGTACTGGTC AATCATCCTC AATGCGTCTC TTTTGAAGTG GGATCGGAGA AAGTCTCCAA AGTGCAGTTC AGCGTTGAGA GTGAATATCT CGAATACTTT GTTATCGACG GCCCGACGCC GAAAGCGGTA CTTGATCGTT ATACCCGTTT TACTGGTCGT CCGGCGCTGC CGCCCGCGTG GTCCTTCGGC CTGTGGCTAA CCACTTCATT TACCACCAAC TACGACGAAG CGACGGTAAA CAGCTTTATC GATGGTATGG CGGGACGCAA TCTGCCACTG CATGTTTTTC ACTTTGACTG TTTCTGGATG AAAGCCTTCC AGTGGTGCGA TTTTGAGTGG GACCCGCTGA CTTTCCCGGA CCCGGAAGGG ATGATCCGCC GCCTGAAAGC GAAAGGGCTA AAAATCTGCG TCTGGATTAA CCCCTATATC GGGCAAAAAT CCCCTGTCTT TAAAGAGTTA CAAGAGAAAG GCTATTTACT CAAACGCCCG GACGGTTCGT TATGGCAGTG GGATAAATGG CAGCCAGGTC TGGCGATTTA TGACTTTACC AATCCGGATG CCTGCAAATG GTACGCCGAC AAACTGAAAG GTCTGGTCGC GATGGGCGTT GATTGCTTTA AGACCGACTT TGGCGAACGT ATTCCAATCG ATGTTCAGTG GTTTGACGGT TCCGATCCGC AGAAAATGCA TAACCATTAT GCGTACATCT ACAACGAACT GGTGTGGAAC GTGCTCAAGG ACACCGTTGG CGAGGAAGAA GCCGTCTTGT TTGCTCGCTC GGCCTCCGTT GGTGCGCAGA AATTCCCGGT ACACTGGGGT GGTGACTGTT ACGCTAACTA CGAATCAATG GCGGAAAGCC TGCGCGGTGG TTTGTCTATT GGCCTTTCAG GTTTTGGTTT CTGGAGCCAC GATATCGGCG GCTTTGAGAA TACCGCTCTG GCGCACGTTT ACAAACGCTG GTGCGCGTTT GGTTTGCTCT CCAGCCATAG CCGTTTACAT GGCAGCAAAT CTTATCGTGT GCCGTGGGCC TACGATGATG AGTCCTGTGA TGTGGTGCGC TTCTTCACGC AACTGAAATG CCGCATGATG CCGTATCTGT ATCGTGAAGC TGCTCGTGCG AACGCGCGGG GTACGCCGAT GATGCGGGCC ATGATGATGG AGTTCCCGGA CGATCCGGCT TGTGATTACC TTGACCGTCA ATACATGTTA GGCGACAACG TGATGGTTGC TCCGGTGTTC AGTGAAGCGG GCGATGTGCA GTTCTACTTG CCGGAAGGTC GCTGGACACA TCTGTGGCAC AACGATGAAC TCGATGGTAG TCGCTGGCAT AAACAGCAGC ACAGCTTCCT GAGTCTGCCC GTTTATGTGC GTGATAACAC CCTACTGGCG CTGGGCAACA ACGAGCAACG TCCCGATTAC GCGTGGCACG AAGGCACGGC ATTCCAGCTC TTTAATCTAC AAGACGGGCA TGAAGCCATC TGTGAAGTGC CCGCTGCTGA CGGTTCCGTT CTTTTCACCC TGAAAGCGGC GCGTACTGGC AACACGATTA CTGTGACTGG TGCGGGCGAG GCGAAGAACT GGACACTGTG CTTGCGCAAT ATTGTGAAAG TAAATGGTCT GCAAGGTGGT TCGCAGGCTG AAAGTGAGCA GGGGCTGGTG GTGACGCCTC AAGGGAATGC GCTGACAATT ACGTTGTAA
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Protein sequence | MKISDGNWLI QPGLNLIHPL QVFEVEQQGN EMVVYAAPRD VRERTWQLDT PLFTLRFFSP QEGIVGVRIE HFQGALNNGP HYPLNILQDV KVTIENTERY AEFKSGNLSA RVSKGEFWSL DFLRNGERIT GSQVKNNGYV QDTNNQRNYM FERLDLGVGE TVYGLGERFT ALVRNGQTVE TWNRDGGTST EQAYKNIPFY MTNRGYGVLV NHPQCVSFEV GSEKVSKVQF SVESEYLEYF VIDGPTPKAV LDRYTRFTGR PALPPAWSFG LWLTTSFTTN YDEATVNSFI DGMAGRNLPL HVFHFDCFWM KAFQWCDFEW DPLTFPDPEG MIRRLKAKGL KICVWINPYI GQKSPVFKEL QEKGYLLKRP DGSLWQWDKW QPGLAIYDFT NPDACKWYAD KLKGLVAMGV DCFKTDFGER IPIDVQWFDG SDPQKMHNHY AYIYNELVWN VLKDTVGEEE AVLFARSASV GAQKFPVHWG GDCYANYESM AESLRGGLSI GLSGFGFWSH DIGGFENTAL AHVYKRWCAF GLLSSHSRLH GSKSYRVPWA YDDESCDVVR FFTQLKCRMM PYLYREAARA NARGTPMMRA MMMEFPDDPA CDYLDRQYML GDNVMVAPVF SEAGDVQFYL PEGRWTHLWH NDELDGSRWH KQQHSFLSLP VYVRDNTLLA LGNNEQRPDY AWHEGTAFQL FNLQDGHEAI CEVPAADGSV LFTLKAARTG NTITVTGAGE AKNWTLCLRN IVKVNGLQGG SQAESEQGLV VTPQGNALTI TL
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