| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5000 |
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| Symbol | rfaP |
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| ID | 6967798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4652121 |
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| End bp | 4652918 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643388681 |
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| Product | lipopolysaccharide core biosynthesis protein RfaP |
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| Protein accession | YP_002273108 |
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| Protein GI | 209396290 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.120387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTGAAC TTAAAGAGCC GTTTGCCACG TTATGGCGCG GTAAAGATCC TTTTGAGGAA
GTTAAAACCT TGCAGGGTGA GGTTTTTCGT GAACTGGAAA CTCGCCGCAC TCTGCGATTT
GAAATGGCGG GCAAAAGCTA TTTTCTCAAA TGGCATCGCG GCACGACCCT GAAAGAGATA
ATCAAAAATT TACTCTCATT GCGGATGCCA GTATTAGGCG CAGACCGCGA ATGGAATGCG
ATTCATCGAC TGCGGGATGT CGGCGTTGAT ACTATGTATG GGGTGGCATT TGGCGAAAAA
GGCATGAATC CGCTGACCAG AACTTCATTT ATTATTACCG AAGATCTGAC ACCAACCATA
AGTCTTGAAG ATTACTGTGC TGACTGGGCG ACTAACCCTC CAGATGTTCG CGTAAAGCGT
ATGCTTATTA AGCGTGTCGC GACGATGGTG CACGATATGC ATGCTGCGGG CATTAACCAC
CGTGACTGTT ATATCTGTCA TTTCCTGCTG CACTTGCCTT TTTCCGGTAA GGAAGAGGAG
TTAAAAATTT CGGTAATTGA CCTGCACCGG GCGCAGCTTC GCACGCGCGT TCCACGTCGT
TGGCGGGATA AAGATCTTAT TGGGCTTTAT TTTTCTTCGA TGAATATCGG CCTGACTCAG
CGGGATATCT GGCGGTTTAT GAAAGTGTAT TTTGCCGCCC CGCTTAAAGA CATTCTCAAG
CAGGAACAAG GACTGCTGTC GCAAGCAGAA GCAAAAGCCA CAAAAATCAG GGAAAGAACG
ATTCGAAAAT CGTTGTAA
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| Protein sequence | MVELKEPFAT LWRGKDPFEE VKTLQGEVFR ELETRRTLRF EMAGKSYFLK WHRGTTLKEI
IKNLLSLRMP VLGADREWNA IHRLRDVGVD TMYGVAFGEK GMNPLTRTSF IITEDLTPTI
SLEDYCADWA TNPPDVRVKR MLIKRVATMV HDMHAAGINH RDCYICHFLL HLPFSGKEEE
LKISVIDLHR AQLRTRVPRR WRDKDLIGLY FSSMNIGLTQ RDIWRFMKVY FAAPLKDILK
QEQGLLSQAE AKATKIRERT IRKSL
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