| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4998 |
|---|
| Symbol | |
|---|
| ID | 6969047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 4650338 |
|---|
| End bp | 4650844 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 643388679 |
|---|
| Product | lipopolysaccharide core biosynthesis protein |
|---|
| Protein accession | YP_002273106 |
|---|
| Protein GI | 209397608 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0418817 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 73 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC GTTTCTTAAA ATCTTGCATA AAAAAAGATT ATTATGAAAA TTTAATTTAT
CAAACCGATC GGGTACGTGG TGAAGGCATC CAATCAATTA ATGACTATTT TTTGCTAGCT
GAACGTAAAA CATTAAATTT CGCTCATTAT TATATTATGC TCATTGAGTA TATTGAAGGT
GTCGGGTTAA ATGAGTATTT GGAAATTTCT GAAGATCTGA AGGATCAATT ATCAGAATCG
ATAAAAGAGT TGCATCAGCA TGGAATGGTG TCTGGCGATC CTCATAAGGG AAATTTTATA
GTATCCGAAA AAGGTTTAAG ACTAATTGAC CTTTCAGGTA AAAAAACAAC CGCTGTTTTA
AAAGCAAAAG ATCGCATTGA TCTTGAACGG CACTATAATA TAAAAAATGA ATTGAAAGAC
TTTGGCTATA CATATCTTAT ATTCAAAAAG AAAATTAAAA AAGTAATCAG GGATGTAAAA
GTCAAACTAG GATTGAAGAG CAAATAA
|
|---|
| Protein sequence | MTERFLKSCI KKDYYENLIY QTDRVRGEGI QSINDYFLLA ERKTLNFAHY YIMLIEYIEG
VGLNEYLEIS EDLKDQLSES IKELHQHGMV SGDPHKGNFI VSEKGLRLID LSGKKTTAVL
KAKDRIDLER HYNIKNELKD FGYTYLIFKK KIKKVIRDVK VKLGLKSK
|
|---|
| |