| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4995 |
|---|
| Symbol | |
|---|
| ID | 6971098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 4646905 |
|---|
| End bp | 4648113 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643388676 |
|---|
| Product | lipid A-core:surface polymer ligase |
|---|
| Protein accession | YP_002273103 |
|---|
| Protein GI | 209399220 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.150422 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAA CATTATTTTT CTCTCTCGAG AAAAAAAACT GGATAGCGTA CTGGAACAGA
GCTCTCGTAT TCTTATTCAT TACCACCTAT TTTTTGGGTG GGATTACAAG GTATAAACAT
CTTATTGTTA TTCTTATGAC AATAACGACA ATCGTCTATC TCTGCAAACG GCCAAAACAC
TATCTCTCAC TATTTAAAAC ATTTCTTTTT GGTAGTGTTG CCATATTAAC TATTGCTGCA
TTGCTGTCAC TTCTTCAATC CCCTGATGCA GGTGCTAGCA TGAAGGAAAT TTTCAAAGCT
ATTATTGAGA ATACTTTACT ATGCACAATA GCAATACCGA TCATATTGAG AGACGAGAAA
AGAGAAGATG TCGAAAAAAT CGTTTTCTTC TCATTTATTA GTGCGTTGGG CTTACGCTGT
TTTTCTGAAT TGATTACCTA TTATAAGGAC TATCAACAAG GGATAATGCC ATTCGCAGAT
TATAGACACC GTAGCATTTC TGACTCGATG GTCTTTTTAT TCCCTGCATT GTTAAATCTC
TGGCTTATCA AATCAGCAAA ATACCGCATT TCTTTTGTGG TTCTAAGCGT TATTTTTATT
TTTCTGATAT TAGGAACTTT ATCCAGAGGG GCCTGGCTTT CCGTGTTAGT CATTGGATTA
ATATGGATTC TGATGTTTAA ACAATGGAAG TTACTATTAG TAGGAGTAAT GGTTGCCATC
ATTGCATTGT CGGTTATTTT CACACATAAG GAGATGACCG CAAAGCTAAC GTATAAACTT
CAACAAACTA ATAGTTCTTA TCGCTATGCA AATGGTACTC AAGGCAGCGC ACTCGATCTA
ATATTAGAAA ATCCTGTTAT TGGTTATGGT TACGGTAACG TTGCATATAA AGATGTCTAT
AATAAACGTG TCATTGATTA TCCAGAATGG ACCTTTAGAC AATCAATAGG GCCACATAAT
TTTGCGCTAT TCATCTGGTT TGGCACTGGT TTATTAGGGC TGGTAAGTCT TATGATGCTA
TACTGTGCAA TATTGAAAGA GTGTATAAAA AATGGCGTCA AGAATAAATA TCGCTCACCA
TATAATGCAT ATTATATAAT CTTACTATCT TTTATAGGTT ATTTTGTTAT CCGTGGAAAC
GTAGAACAAA TTGAACCAAA TTTATTAGGC GTTTACGCCG GCTTATTATT AGCGATGAAA
AACAAGTAA
|
|---|
| Protein sequence | MTSTLFFSLE KKNWIAYWNR ALVFLFITTY FLGGITRYKH LIVILMTITT IVYLCKRPKH
YLSLFKTFLF GSVAILTIAA LLSLLQSPDA GASMKEIFKA IIENTLLCTI AIPIILRDEK
REDVEKIVFF SFISALGLRC FSELITYYKD YQQGIMPFAD YRHRSISDSM VFLFPALLNL
WLIKSAKYRI SFVVLSVIFI FLILGTLSRG AWLSVLVIGL IWILMFKQWK LLLVGVMVAI
IALSVIFTHK EMTAKLTYKL QQTNSSYRYA NGTQGSALDL ILENPVIGYG YGNVAYKDVY
NKRVIDYPEW TFRQSIGPHN FALFIWFGTG LLGLVSLMML YCAILKECIK NGVKNKYRSP
YNAYYIILLS FIGYFVIRGN VEQIEPNLLG VYAGLLLAMK NK
|
|---|
| |