| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4994 |
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| Symbol | rfaC |
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| ID | 6969335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4645916 |
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| End bp | 4646908 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643388675 |
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| Product | ADP-heptose:LPS heptosyl transferase I |
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| Protein accession | YP_002273102 |
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| Protein GI | 209399933 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.041745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGGTTT TGATCGTTAA AACATCGTCG ATGGGCGATG TTCTCCATAC GTTGCCCGCA
CTCACTGATG CCCAGCAGGC AATCCCAGAA ATTAAGTTTG ACTGGGTGGT GGAAGAAGGG
TTCGCACAGA TTCCTTCCTG GCACGCTGCC GTTGAGCGAG TTATTCCTGT GGCAATACGT
CGCTGGCGTA AAGCCTGGTT CTCGGCCCCT ATAAAAGCTG AACGCAAAGC GTTTCGTGAA
GCGCTACAAG CAGAGAACTA TGACGCAGTT ATCGACGCTC AGGGGCTGGT AAAAAGCGCG
GCGCTGGTTA CGCGTCTGGC ACATGGCGTA AAGCATGGCA TGGACTGGCA AACCGCTCGC
GAACCTTTAG CCAGCCTGTT TTACAATCGT AAGCATCATA TTGCAAAACA GCAGCACGCC
GTAGAACGCA CCCGCGAACT GTTTGCCAAA AGTTTGGGCT ATAGCAAACC GCAAACCCAG
GGCGATTATG CTATCGCACA GCATTTTCTG ACGAACCTGC CTACAGATGC TGGCGAATAT
GCCGTATTTC TTCATGCGAC GACCCGTGAT GATAAACACT GGCCGGAAGA ACACTGGCGA
GAATTGATTG GTTTACTGGC TGATTCAGGA ATACGGATTA AACTTCCGTG GGGCGCGCCG
CATGAGGAAG AACGGGCGAA ACGACTGGCG GAAGGATTTG CTTATGTTGA AGTATTGCCG
AAGATGAGTC TGGAAGGCGT TGCCCGCGTG CTGGCCGGGG CTAAATTTGT AGTGTCGGTG
GATACGGGGT TAAGCCATTT AACGGCGGCA CTGGATAGAC CCAATATCAC GGTTTATGGA
CCAACCGATC CGGGATTAAT TGGTGGGTAT GGGGAGAATC AAGTAGAGTG TCGTTCTACA
AGTATGTCTC TTGCAGATTT GCCAGCTCAA ACCGTTTTTC AAAATTTAAA TCTTGAAATA
ATAACCAATA AGTTGACATC GGAGATAAGA TGA
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| Protein sequence | MRVLIVKTSS MGDVLHTLPA LTDAQQAIPE IKFDWVVEEG FAQIPSWHAA VERVIPVAIR
RWRKAWFSAP IKAERKAFRE ALQAENYDAV IDAQGLVKSA ALVTRLAHGV KHGMDWQTAR
EPLASLFYNR KHHIAKQQHA VERTRELFAK SLGYSKPQTQ GDYAIAQHFL TNLPTDAGEY
AVFLHATTRD DKHWPEEHWR ELIGLLADSG IRIKLPWGAP HEEERAKRLA EGFAYVEVLP
KMSLEGVARV LAGAKFVVSV DTGLSHLTAA LDRPNITVYG PTDPGLIGGY GENQVECRST
SMSLADLPAQ TVFQNLNLEI ITNKLTSEIR
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