Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4991 |
Symbol | |
ID | 6967626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 4642763 |
End bp | 4643620 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643388672 |
Product | hypothetical protein |
Protein accession | YP_002273099 |
Protein GI | 209398472 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02192] conserved hypothetical protein HtrL |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000643589 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCAT CCACCACAAT TATCACTGCA TATTTTGACA TTGGTAGAGG GGATTGGACT GCTAATAAAG GGTTCCGTGA AAAACTAGCT CGTTCAGTTG ATGTTTATTT TAGTTACTTT GAGCGTCTGG CCGCACTTGA AAATGAGATG ATTATTTTCA CTTCTCCCGA TTTGAAACCA AGGGTTGAAG CGATTCGCAA CGGAAAACCA ACAACGGTTA TCGTTATCGA TATAAAAAAG AAATTTAGAT ATATCAGAAG TCGTATCGAA AAAATTCAAA AAGATGAGTC GTTTACAAAT AGACTTGAGC CTCGACAATT AAAAAACCCA GAGTACTGGT CACCAGAGTA TGTTTTGGTA TGTAACCTTA AGGCCTATTT TGTAAATAAA GCTATCAACA TGGGCTTAGT GAAAACGCCT CTTGTTGCGT GGATAGATTT TGGCTATTGC CGTAAGCCAA ATGTAACTCG AGGATTGAAA ATTTGGGATT TCCCATTTGA TGAAAGTAAG ATGCATCTTT TCACTATAAA AAAAGGGCTT ACTGTCACAT CTCAACAACA GGTTTTTGAT TTCATGATTG GCAATCATGT ATATATTATT GGGGGCGCAA TTGTTGGTTC ACAGCATAAA TGGAAAGAAT TCTATAAATT AGTTCTGGAA AGTCAAAAAA TAACACTAAA TAATAACATT GTGGATGATG ACCAGGGCAT TTTTGTCATG TGCTATTACA AACGCCCCGA TCTCTTCAAC CTAAACTATC TGGGGAGAGG AAAATGGTTC GATTTGTTTC GCTGCTTCAG GAGTAACACT TTAGGGGCAA AAATGCAGGC GCTGAGAATT TTCCTTTCAA GAAAATAG
|
Protein sequence | MKSSTTIITA YFDIGRGDWT ANKGFREKLA RSVDVYFSYF ERLAALENEM IIFTSPDLKP RVEAIRNGKP TTVIVIDIKK KFRYIRSRIE KIQKDESFTN RLEPRQLKNP EYWSPEYVLV CNLKAYFVNK AINMGLVKTP LVAWIDFGYC RKPNVTRGLK IWDFPFDESK MHLFTIKKGL TVTSQQQVFD FMIGNHVYII GGAIVGSQHK WKEFYKLVLE SQKITLNNNI VDDDQGIFVM CYYKRPDLFN LNYLGRGKWF DLFRCFRSNT LGAKMQALRI FLSRK
|
| |