| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4989 |
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| Symbol | tdh |
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| ID | 6967787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4640257 |
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| End bp | 4641282 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643388670 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_002273097 |
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| Protein GI | 209400006 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGCGT TATCCAAACT GAAAGCGGAA GAGGGCATCT GGATGACCGA CGTTCCTGTA
CCGGAACTCG GGCATAACGA TCTGCTGATT AAAATCCGTA AAACAGCCAT CTGCGGGACT
GACGTTCACA TCTATAACTG GGATGAGTGG TCGCAAAAAA CCATCCCGGT GCCGATGGTC
GTAGGCCATG AATATGTCGG TGAAGTGGTA GGTATTGGTC AGGAAGTGAA AGGCTTCAAA
ATCGGCGATC GCGTTTCTGG CGAAGGCCAT ATCACCTGCG GTCACTGTCG CAACTGTCGT
GGCGGTCGTA CCCATCTGTG CCGCAACACC ATTGGTGTCG GTGTTAACCG TCCGGGCTGC
TTCGCCGAAT ATCTGGTGAT TCCGGCGTTC AACGCTTTCA AAATCCCCGA CAATATCTCC
GACGACCTGG CTTCCATTTT TGATCCCTTC GGTAACGCCG TGCATACCGC GCTGTCGTTC
GATCTGGTGG GCGAAGATGT GCTGGTTTCT GGTGCAGGTC CGATAGGTAT TATGGCTGCG
GCGGTGGCGA AACACGTTGG TGCACGCAAT GTGGTGATCA CCGATGTTAA CGAATACCGC
CTTGAGCTGG CGCGCAAAAT GGGTATCACC CGTGCGGTTA ACGTCGCGAA AGAAAACCTT
AATGATGTGA TGGCTGAACT GGGCATGACC GAAGGCTTTG ATGTCGGTCT GGAAATGTCC
GGCGCGCCGC CAGCGTTTCG TACCATGCTC GATACCATGA ACCACGGCGG TCGTATTGCG
ATGCTGGGTA TTCCACCGTC TGACATGTCT ATCGACTGGA CCAAAGTGAT CTTTAAAGGC
TTGTTCATTA AAGGCATTTA CGGTCGTGAG ATGTTTGAAA CCTGGTACAA GATGGCGGCG
CTGATTCAGT CTGGCCTCGA TCTCTCGCCG ATCATTACCC ATCGTTTCTC TATCGATGAT
TTCCAGAAGG GCTTTGACGC TATGTGTTCG GGCCAGTCCG GGAAAGTTAT TCTGAGCTGG
GATTAA
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| Protein sequence | MKALSKLKAE EGIWMTDVPV PELGHNDLLI KIRKTAICGT DVHIYNWDEW SQKTIPVPMV
VGHEYVGEVV GIGQEVKGFK IGDRVSGEGH ITCGHCRNCR GGRTHLCRNT IGVGVNRPGC
FAEYLVIPAF NAFKIPDNIS DDLASIFDPF GNAVHTALSF DLVGEDVLVS GAGPIGIMAA
AVAKHVGARN VVITDVNEYR LELARKMGIT RAVNVAKENL NDVMAELGMT EGFDVGLEMS
GAPPAFRTML DTMNHGGRIA MLGIPPSDMS IDWTKVIFKG LFIKGIYGRE MFETWYKMAA
LIQSGLDLSP IITHRFSIDD FQKGFDAMCS GQSGKVILSW D
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