| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4978 |
|---|
| Symbol | lldD |
|---|
| ID | 6966815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 4629775 |
|---|
| End bp | 4630965 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643388660 |
|---|
| Product | L-lactate dehydrogenase |
|---|
| Protein accession | YP_002273087 |
|---|
| Protein GI | 209396531 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTATTT CCGCAGCCAG CGATTATCGC GCCGCAGCGC AACGCATTCT GCCGCCGTTC
CTGTTCCACT ATATGGATGG TGGTGCATAT TCTGAATACA CGCTGCGCCG CAACGTGGAA
GATTTGTCAG AAGTGGCACT GCGCCAGCGT ATTCTGAAAA ACATGTCTGA CTTAAGCCTG
GAAACGACGC TGTTTAATGA GAAATTGTCG ATGCCGGTAG CACTGGCACC GGTGGGTTTG
TGTGGCATGT ATGCGCGTCG TGGCGAAGTT CAGGCAGCCA AAGCGGCGGA CGCGCATGGC
ATTCCGTTTA CTCTCTCAAC GGTTTCCGTT TGCCCGATTG AAGAAGTCGC GCCAGCCATC
AAGCGCCCAA TGTGGTTCCA GCTTTATGTA CTGCGCGATC GCGGCTTTAT GCGTAACGCG
CTGGAGCGAG CAAAAGCAGC GGGTTGTTCG ACGCTGGTTT TCACCGTGGA TATGCCGACA
CCGGGAGCGC GTTATCGTGA TGCGCATTCT GGGATGAGCG GCCCAAATGC GGCAATGCGC
CGCTACTTGC AAGCGGTGAC GCATCCGCAA TGGGCGTGGG ATGTGGGCCT GAACGGTCGT
CCGCATGATT TAGGTAATAT TTCGGCTTAC CTCGGCAAAC CGACCGGACT GGAAGATTAC
ATCGGCTGGC TGGGGAATAA CTTCGATCCG TCCATCTCAT GGAAAGACCT TGAGTGGATC
CGCGATTTCT GGGATGGCCC GATGGTGATC AAAGGGATCC TCGATCCGGA AGATGCGCGC
GATGCAGTAC GTTTTGGTGC TGATGGGATT GTAGTTTCTA ACCACGGTGG CCGCCAGCTG
GACGGTGTAC TCTCTTCCGC TCGTGCGTTG CCCGCTATTG CAGATGCGGT GAAAGGTGAT
ATCGCCATTC TGGCGGATAG CGGAATTCGT AACGGGCTTG ATGTCGTGCG TATGATTGCG
CTCGGTGCCG ACACCGTACT GCTGGGTCGT GCTTTCCTGT ATGCGCTGGC AACAGCGGGC
CAGGCGGGTG TAGCTAACCT GCTAAATCTG ATCGAGAAAG AGATGAAAGT GGCAATGACG
CTGACTGGCG CGAAATCGAT CAGTGAAATT ACGCAAGATT CGCTGGTGCA GGGGCTGGGT
AAAGAGTTGC CTACGGCACT GGCTCCGATG GCGAAAGGGA ATGCGGCATA G
|
|---|
| Protein sequence | MIISAASDYR AAAQRILPPF LFHYMDGGAY SEYTLRRNVE DLSEVALRQR ILKNMSDLSL
ETTLFNEKLS MPVALAPVGL CGMYARRGEV QAAKAADAHG IPFTLSTVSV CPIEEVAPAI
KRPMWFQLYV LRDRGFMRNA LERAKAAGCS TLVFTVDMPT PGARYRDAHS GMSGPNAAMR
RYLQAVTHPQ WAWDVGLNGR PHDLGNISAY LGKPTGLEDY IGWLGNNFDP SISWKDLEWI
RDFWDGPMVI KGILDPEDAR DAVRFGADGI VVSNHGGRQL DGVLSSARAL PAIADAVKGD
IAILADSGIR NGLDVVRMIA LGADTVLLGR AFLYALATAG QAGVANLLNL IEKEMKVAMT
LTGAKSISEI TQDSLVQGLG KELPTALAPM AKGNAA
|
|---|
| |