| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4944 |
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| Symbol | xylH |
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| ID | 6970675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4582995 |
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| End bp | 4584176 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643388627 |
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| Product | D-xylose ABC transporter, permease protein |
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| Protein accession | YP_002273054 |
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| Protein GI | 209398987 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4214] ABC-type xylose transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0184849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAAA GCAATCCGTC TGAAGTGAAA TTGGCCGTAC CGACATCCGG TGGCTTCTCC
GGGCTGAAAT CACTGAATTT GCAGGTCTTC GTGATGATTG CAGCTATCAT CGCAATCATG
CTGTTCTTTA CCTGGACCAC CGATGGTGCC TACTTAAGCG CCCGTAACGT CTCCAACCTG
TTACGCCAGA CCGCGATTAC CGGCATCCTC GCGGTAGGAA TGGTGTTCGT CATAATTTCT
GCTGAAATCG ACCTTTCCGT CGGCTCAATG ATGGGGCTAT TAGGTGGCGT CGCGGCGATT
TGTGACGTCT GGCTAGGCTG GCCTTTGCCA CTTACCATCA TTGTGACGTT GGTTCTGGGA
CTGCTTCTCG GTGCCTGGAA CGGATGGTGG GTCGCGTACC GCAAAGTCCC TTCATTTATT
GTCACTCTCG CGGGCATGTT GGCATTTCGC GGCATACTCA TTGGCATCAC CAACGGCACG
ACTGTATCCC CCACCAGCGC CGCGATGTCA CAAATTGGGC AAAGCTATCT CCCCGCCAGC
ACCGGCTTCA TCATTGGCGC GCTTGGCTTA ATGGCTTTTG TTGGCTGGCA ATGGCGCGGA
AGAATGCGCC GTCAGGCTTT GGGTTTGCAG TCTCCAGCCT CTACCGCAGT AGTCGGTCGC
CAGGCTTTAA CCGCTATCAT CGTATTAGGC GCAATCTGGC TGTTGAATGA TTACCGTGGC
GTTCCTACTC CTGTTCTGCT GCTGACGTTG CTGTTACTCG GCGGAATGTT TATGGCAACG
CGGACAGCAT TTGGACGACG CATTTATGCC ATCGGCGGCA ATCTGGAAGC AGCACGTCTC
TCCGGAATTA ACGTTGAACG CACCAAACTT GCCGTGTTCG CTATTAACGG ATTAATGGTA
GCCATCGCCG GATTAATCCT CAGTTCTCGA CTTGGCGCTG GTTCACCTTC TGCGGGGAAT
ATCGCCGAGC TGGACGCAAT TGCAGCATGC GTGATTGGCG GCACCAGTCT GGCAGGCGGC
GTCGGGAGCG TGGCTGGAGC GGTAATGGGG GCATTCATCA TGGCTTCACT GGATAACGGT
ATGAGTATGA TGGATGTACC GACCTTCTGG CAGTATATCG TTAAAGGTGC GATTCTGTTG
CTGGCAGTAT GGATGGACTC CGCAACCAAA CGCCGTTCTT GA
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| Protein sequence | MSKSNPSEVK LAVPTSGGFS GLKSLNLQVF VMIAAIIAIM LFFTWTTDGA YLSARNVSNL
LRQTAITGIL AVGMVFVIIS AEIDLSVGSM MGLLGGVAAI CDVWLGWPLP LTIIVTLVLG
LLLGAWNGWW VAYRKVPSFI VTLAGMLAFR GILIGITNGT TVSPTSAAMS QIGQSYLPAS
TGFIIGALGL MAFVGWQWRG RMRRQALGLQ SPASTAVVGR QALTAIIVLG AIWLLNDYRG
VPTPVLLLTL LLLGGMFMAT RTAFGRRIYA IGGNLEAARL SGINVERTKL AVFAINGLMV
AIAGLILSSR LGAGSPSAGN IAELDAIAAC VIGGTSLAGG VGSVAGAVMG AFIMASLDNG
MSMMDVPTFW QYIVKGAILL LAVWMDSATK RRS
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