Gene ECH74115_4938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4938 
Symbol 
ID6972094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4576199 
End bp4576636 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content41% 
IMG OID643388621 
Producthypothetical protein 
Protein accessionYP_002273048 
Protein GI209400282 
COG category[S] Function unknown 
COG ID[COG4682] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.102561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACA AAATATCAAC CTATTCACCG GCCTTTAGTA TTGTGTCATG GATAGCTCTC 
GTTGGTGGTA TCGTTACCTA TCTGTTAGGG CTATGGAATG CAGAGATGCA GTTAAATGAA
AAAGGATATT ATTTTGCCGT ACTGGTATTA GGACTGTTTT CTGCGGCGTC TTATCAAAAG
ACCGTTCGGG ACAAGTATGA AGGCATACCG ACCACTTCCA TTTATTATAT GACCTGCCTG
ACTGTCTTTA TTATCTCTGT TGCATTACTG ATGGTAGGTC TGTGGAATGC GACATTATTA
CTCAGCGAAA AAGGTTTTTA TGGACTGGCT TTCTTCTTAA GCTTGTTTGG TGCAGTAGCG
GTGCAGAAAA ATATTCGTGA TGCCGGAATA AACCCACCAA AAGAAACACA GGTTACCCAG
GAAGAATACA GCGAATAA
 
Protein sequence
MDNKISTYSP AFSIVSWIAL VGGIVTYLLG LWNAEMQLNE KGYYFAVLVL GLFSAASYQK 
TVRDKYEGIP TTSIYYMTCL TVFIISVALL MVGLWNATLL LSEKGFYGLA FFLSLFGAVA
VQKNIRDAGI NPPKETQVTQ EEYSE