| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4924 |
|---|
| Symbol | |
|---|
| ID | 6967640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 4562915 |
|---|
| End bp | 4563613 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643388607 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002273034 |
|---|
| Protein GI | 209396161 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG5571] Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.335605 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCATAA AAAAAAGCGG TGGTCGCTGG CAGCTAAGCC TGCTGGCGAG TGTGGTAATC
AGTGCCTTTT TTCTCAACAC AGCTTACGCC TGGCAACAAG AATATATCGT TGATACGCAA
CCCGGGCATT CCACAGAGCG TTACACCTGG GATAGTGATC ATCAACCTGA TTACAACGAT
ATTTTGTCGC AACGTATTCA AAGTAGCCAA AGGGCGCTGG GACTGGAAGT CAATCTGGCG
GAAGAAACCC CTGTGGATGT GACCAGCAGT ATGAGTATGG GCTGGAATTT TCCTTTATAT
GAACAGGTTA CAACTGGCCC GGTCGCGGCA TTACATTACG ATGGCACAAC CACCTCGATG
TATAACGAGT TTGGCGACAG TACTACCACG CTGACCGATC CGTTATGGCA TGCCAGCGTG
AGTACCTTAG GCTGGCGTGT TGACTCCCGG CTTGGCGATC TCCGACCCTG GGCGCAAATC
AGCTATAACC AGCAATTTGG CGAGAATATC TGGAAGGCGC AATCAGGCCT GAGCCGGATG
ACGGCGACAA ACCAGAACGG CAACTGGCTG GATGTCACCG TAGGCGCTGA TATGTTGCTC
AATCAAAATA TTGCCGCCTA TGCCGCGCTA TCTCAGGCAG AAAATACCAC TAACAATAGC
GATTATCTGT ATACGATGGG GGTTAGTGCC AGATTTTAA
|
|---|
| Protein sequence | MIIKKSGGRW QLSLLASVVI SAFFLNTAYA WQQEYIVDTQ PGHSTERYTW DSDHQPDYND
ILSQRIQSSQ RALGLEVNLA EETPVDVTSS MSMGWNFPLY EQVTTGPVAA LHYDGTTTSM
YNEFGDSTTT LTDPLWHASV STLGWRVDSR LGDLRPWAQI SYNQQFGENI WKAQSGLSRM
TATNQNGNWL DVTVGADMLL NQNIAAYAAL SQAENTTNNS DYLYTMGVSA RF
|
|---|
| |