Gene ECH74115_4923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4923 
Symbol 
ID6968122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4561484 
End bp4562686 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content51% 
IMG OID643388606 
Productinner membrane protein YhjX 
Protein accessionYP_002273033 
Protein GI209396715 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID[TIGR00890] Oxalate/Formate Antiporter 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCTT CAAATTATCA GCGTACCCGC TGGTTGACAC TCATCGGTAC TATCATTACC 
CAGTTTGCGC TGGGGTCGGT TTATACCTGG AGCCTGTTTA ACGGCGCGCT TTCCGCCAAG
CTGGATGCGC CGGTAAGCCA GGTCGCTTTC TCTTTCGGCT TGTTAAGTCT GGGGCTGGCA
ATATCGTCTT CTGTTGCGGG CAAATTGCAG GAACGTTTTG GTGTTAAACG CGTCACCATC
GCTTCCGGCA TTTTGCTGGG ATTAGGGTTC TTCCTGACAG CGCATTCTGA CAACCTGATG
ATGCTGTGGT TAAGCGCCGG TGTGCTGGTC GGTCTGGCGG ATGGCGCGGG TTACCTGCTG
ACGCTCTCTA ACTGCGTGAA ATGGTTCCCG GAGCGTAAAG GTCTGATCTC CGCGTTCGCT
ATCGGTTCTT ATGGTCTGGG TAGCCTGGGT TTCAAATTTA TCGACACGCA GCTGCTGGAA
ACGGTCGGTC TGGAAAAAAC CTTTGTGATT TGGGGAGCGA TTGCGCTGGT GATGATTGTT
TTCGGCGCAA CGTTAATGAA AGACGCACCA AAACAGGAAG TGAAAACCAG CAATGGTGTG
GTGGAGAAAG ATTACACGCT GGCAGAGTCG ATGCGTAAAC CGCAGTACTG GATGTTAGCG
GTAATGTTCC TGACTGCCTG CATGAGCGGC CTGTACGTGA TTGGGGTAGC GAAAGATATC
GCCCAAAGTC TGGCACACCT TGATGTGGTT TCTGCAGCCA ATGCAGTCAC TGTTATTTCC
ATCGCCAACC TTTCAGGTCG TCTGGTGCTG GGCATTCTGT CTGACAAAAT CGCCCGTATC
CGTGTTATCA CCATTGGTCA GGTAATTTCG CTGGTGGGTA TGGCGGCCCT GCTGTTTGCA
CCATTGAATG CAGTGACGTT CTTTGCAGCG ATTGCCTGCG TGGCATTTAA CTTTGGCGGC
ACTATTACCG TCTTTCCGTC ACTGGTCAGT GAGTTCTTCG GCCTCAATAA CCTGGCGAAA
AACTACGGTG TGATTTACCT CGGTTTCGGT ATCGGTAGCA TTTGTGGTTC GATTATCGCC
TCACTGTTTG GCGGCTTCTA TGTGAAGTTC TACGTCATCT TTGCTCTGCT GATTCTGTCA
TTGGCGCTTT CTACGACGAT TCGTCAGCCA GAGCAGAAAG TATTGCGTGA GGCGCATATT
TAG
 
Protein sequence
MTPSNYQRTR WLTLIGTIIT QFALGSVYTW SLFNGALSAK LDAPVSQVAF SFGLLSLGLA 
ISSSVAGKLQ ERFGVKRVTI ASGILLGLGF FLTAHSDNLM MLWLSAGVLV GLADGAGYLL
TLSNCVKWFP ERKGLISAFA IGSYGLGSLG FKFIDTQLLE TVGLEKTFVI WGAIALVMIV
FGATLMKDAP KQEVKTSNGV VEKDYTLAES MRKPQYWMLA VMFLTACMSG LYVIGVAKDI
AQSLAHLDVV SAANAVTVIS IANLSGRLVL GILSDKIARI RVITIGQVIS LVGMAALLFA
PLNAVTFFAA IACVAFNFGG TITVFPSLVS EFFGLNNLAK NYGVIYLGFG IGSICGSIIA
SLFGGFYVKF YVIFALLILS LALSTTIRQP EQKVLREAHI