Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4923 |
Symbol | |
ID | 6968122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 4561484 |
End bp | 4562686 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643388606 |
Product | inner membrane protein YhjX |
Protein accession | YP_002273033 |
Protein GI | 209396715 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00890] Oxalate/Formate Antiporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACCTT CAAATTATCA GCGTACCCGC TGGTTGACAC TCATCGGTAC TATCATTACC CAGTTTGCGC TGGGGTCGGT TTATACCTGG AGCCTGTTTA ACGGCGCGCT TTCCGCCAAG CTGGATGCGC CGGTAAGCCA GGTCGCTTTC TCTTTCGGCT TGTTAAGTCT GGGGCTGGCA ATATCGTCTT CTGTTGCGGG CAAATTGCAG GAACGTTTTG GTGTTAAACG CGTCACCATC GCTTCCGGCA TTTTGCTGGG ATTAGGGTTC TTCCTGACAG CGCATTCTGA CAACCTGATG ATGCTGTGGT TAAGCGCCGG TGTGCTGGTC GGTCTGGCGG ATGGCGCGGG TTACCTGCTG ACGCTCTCTA ACTGCGTGAA ATGGTTCCCG GAGCGTAAAG GTCTGATCTC CGCGTTCGCT ATCGGTTCTT ATGGTCTGGG TAGCCTGGGT TTCAAATTTA TCGACACGCA GCTGCTGGAA ACGGTCGGTC TGGAAAAAAC CTTTGTGATT TGGGGAGCGA TTGCGCTGGT GATGATTGTT TTCGGCGCAA CGTTAATGAA AGACGCACCA AAACAGGAAG TGAAAACCAG CAATGGTGTG GTGGAGAAAG ATTACACGCT GGCAGAGTCG ATGCGTAAAC CGCAGTACTG GATGTTAGCG GTAATGTTCC TGACTGCCTG CATGAGCGGC CTGTACGTGA TTGGGGTAGC GAAAGATATC GCCCAAAGTC TGGCACACCT TGATGTGGTT TCTGCAGCCA ATGCAGTCAC TGTTATTTCC ATCGCCAACC TTTCAGGTCG TCTGGTGCTG GGCATTCTGT CTGACAAAAT CGCCCGTATC CGTGTTATCA CCATTGGTCA GGTAATTTCG CTGGTGGGTA TGGCGGCCCT GCTGTTTGCA CCATTGAATG CAGTGACGTT CTTTGCAGCG ATTGCCTGCG TGGCATTTAA CTTTGGCGGC ACTATTACCG TCTTTCCGTC ACTGGTCAGT GAGTTCTTCG GCCTCAATAA CCTGGCGAAA AACTACGGTG TGATTTACCT CGGTTTCGGT ATCGGTAGCA TTTGTGGTTC GATTATCGCC TCACTGTTTG GCGGCTTCTA TGTGAAGTTC TACGTCATCT TTGCTCTGCT GATTCTGTCA TTGGCGCTTT CTACGACGAT TCGTCAGCCA GAGCAGAAAG TATTGCGTGA GGCGCATATT TAG
|
Protein sequence | MTPSNYQRTR WLTLIGTIIT QFALGSVYTW SLFNGALSAK LDAPVSQVAF SFGLLSLGLA ISSSVAGKLQ ERFGVKRVTI ASGILLGLGF FLTAHSDNLM MLWLSAGVLV GLADGAGYLL TLSNCVKWFP ERKGLISAFA IGSYGLGSLG FKFIDTQLLE TVGLEKTFVI WGAIALVMIV FGATLMKDAP KQEVKTSNGV VEKDYTLAES MRKPQYWMLA VMFLTACMSG LYVIGVAKDI AQSLAHLDVV SAANAVTVIS IANLSGRLVL GILSDKIARI RVITIGQVIS LVGMAALLFA PLNAVTFFAA IACVAFNFGG TITVFPSLVS EFFGLNNLAK NYGVIYLGFG IGSICGSIIA SLFGGFYVKF YVIFALLILS LALSTTIRQP EQKVLREAHI
|
| |