Gene ECH74115_4922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4922 
Symbol 
ID6969284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4560616 
End bp4561140 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content47% 
IMG OID643388605 
Productfimbrial protein 
Protein accessionYP_002273032 
Protein GI209397169 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG TCGTTTTTGC CTTAACCGCA CTGGCGTTAA CTTCTGGCAC TGTATTCGCA 
GCAGAGTCTG GTGACGGCAC GGTTAAATTT ACAGGCGAGA TCGTGGATTC ACCTTGCGTA
CTGTCCGTTG ACTCTCAGAA CCAGGAAGTT GTGTTGGGTC AGGTACAAAA ATCTGTATTT
GCTGCGGTTG GTGACAAATC CCCGGCAAAA CCTTTCGAAA TCAAACTGGA AGATTGCGAT
ACCACCACGA TGAAAAAAGC CAATGTGAGC TTTAGTGGTG TTGGTGATGC AGATAAATCT
GATCTGATTT CTGTTAGCAC TGAAGCGGGC GCGGCCAAAG GTGTTGGTAT CGGTATTTAT
GATAACAGCA ATACCCTGGT CGCTCTTAAC GGTGGTAAAG CAAGTGTTGA TCTGAGTAAA
GGCCAGACGG TTCTCTACTT TACCGCTAAC TACGTTTCTA CTCTGGCAAC GGTAACGACC
GGTTACGGCA ATGCGCAGGT CGATTTCAAC CTGTCTTACG AGTAA
 
Protein sequence
MKKVVFALTA LALTSGTVFA AESGDGTVKF TGEIVDSPCV LSVDSQNQEV VLGQVQKSVF 
AAVGDKSPAK PFEIKLEDCD TTTMKKANVS FSGVGDADKS DLISVSTEAG AAKGVGIGIY
DNSNTLVALN GGKASVDLSK GQTVLYFTAN YVSTLATVTT GYGNAQVDFN LSYE