| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4918 |
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| Symbol | |
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| ID | 6969036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4556193 |
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| End bp | 4557248 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643388603 |
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| Product | protein LpfD |
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| Protein accession | YP_002273030 |
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| Protein GI | 209397444 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGG CAATAGCATT ATCCTTATTA GGATGCGTAT TCGGATTTTC TGGCAAGGCA
TTTGCCGGAG ATGCGTGGGG GCCATGTACC CCCGCGGATG GCACGACTTA TCACTATAAT
GTCGATGTGG ATGTTGGTAT ACCTGATGCG GCAAAAAACG TCGCAGGAAC GGTTTTACCG
GATGTCCTTA ACTGGTCTAA TGGACAAAAC GTATCGCTAA TTTGTGAATG TCCTGATTCT
TATAAGAATG AAAAAGATAC TCTAGTGCAG GGGGTGAGTA TGCTTCCCCC TTCTGGCCGT
ACGGTTGACA GTATGAAATA TTATACTTTG ACGGAGGAAC TGGAGGTTGC GACGAACATT
CGCATCAGTA CCAGTGTGTA TGGGTTTGTT CCTTTCAAAA ACCAGCAGGC GCTGCAAACA
ACCGGATGCA ACAAAGTCAT TACTACGCCC TATATGGGCG GCGCAGGTCT ACTTTCCTTT
GCTATTACTA AACCCTTTAT CGGCGATTCC GTCATCCCTC TGACGTTAAT TGCCGAACTG
TATGCCTCGA AAACAAATAA AGATTACGGA ACAATACCCA TATCTTCCGT ATCTATTCAG
GGGCGTGTCA CCGTAACCCA GGATTGCGAA ATTAAACCCG GCACGGTGCT GGATGTGCCA
TTTGGTGAAT TCCCCTCCTC GGCGTTTAAA AACAGGCAAG GGCAAATGCC TGAAGGTGCG
ACAGAGCAAG AAATTAACCT CAGCTTCGAT TGCAACAATA TCTCTGATGG TATCAAGGTT
GCGTTGCGCC TTGAGGGGGC AACCAATGCT GACGATCCCC GAGCGGTGGA TATGGGCAAC
CCCGATATTG GCGTACTGGT GAAAGATTCC AGCGGCAAAA TTTTGGTACC GAATGATTCA
AGCAGCACCA CGTTATTAAA TTTGAGCAGC CTGGATTCTA AAACTCACCG CAATGCCGCG
ATTCGACTGC TGGCTTTACC GATTAGCACG ACGGGTAAAG CGCCTAAAGG CGGGACGTTT
GAAGGCGTAA CGACCATATA TCTTGAAATG GAGTGA
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| Protein sequence | MKAAIALSLL GCVFGFSGKA FAGDAWGPCT PADGTTYHYN VDVDVGIPDA AKNVAGTVLP
DVLNWSNGQN VSLICECPDS YKNEKDTLVQ GVSMLPPSGR TVDSMKYYTL TEELEVATNI
RISTSVYGFV PFKNQQALQT TGCNKVITTP YMGGAGLLSF AITKPFIGDS VIPLTLIAEL
YASKTNKDYG TIPISSVSIQ GRVTVTQDCE IKPGTVLDVP FGEFPSSAFK NRQGQMPEGA
TEQEINLSFD CNNISDGIKV ALRLEGATNA DDPRAVDMGN PDIGVLVKDS SGKILVPNDS
SSTTLLNLSS LDSKTHRNAA IRLLALPIST TGKAPKGGTF EGVTTIYLEM E
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