Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4911 |
Symbol | dppB |
ID | 6970111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 4550022 |
End bp | 4551167 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643388597 |
Product | dipeptide transporter permease DppB |
Protein accession | YP_002273025 |
Protein GI | 209398114 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTCTGC GTGCAGCGCC ATCCGGCAGC AATACTTCAT TCCCTGCCCG ACCTGGGCGG GAATTGATTT GTGAGCAATA CAGACACGCA GTTCCAGGCT GCGGGTCACT ACAGAGAATC CGGGTTATGT TGCAGTTTAT TCTCCGACGT TTGGGACTCG TCATCCCCAC GTTTATCGGT ATTACCCTTC TCACATTTGC CTTTGTCCAC ATGATCCCGG GCGATCCTGT GATGATCATG GCGGGCGAAC GTGGGATCTC CCCAGAGCGT CACGCGCAGT TGCTGGCTGA ACTCGGCTTA GATAAACCGA TGTGGCAGCA GTATCTCCAT TACATTTGGG GCGTTATGCA TGGCGATCTA GGCATTTCAA TGAAAAGCCG AATTCCGGTA TGGGAAGAGT TCGTGCCGCG CTTTCAGGCC ACGCTGGAAC TTGGCGTCTG CGCGATGATT TTTGCGACCG CGGTCGGCAT TCCGGTTGGT GTGCTGGCCG CGGTTAAACG CGGTTCCATT TTCGATCACA CAGCGGTTGG CCTGGCGCTG ACAGGTTATT CAATGCCTAT CTTCTGGTGG GGCATGATGC TGATCATGCT GGTTTCGGTG CACTGGAACC TGACACCCGT CTCCGGTCGC GTGAGCGATA TGGTGTTCCT CGATGATTCC AATCCGTTAA CCGGTTTTAT GCTGATCGAC ACCGCCATCT GGGGTGAAGA CGGTAACTTT ATCGATGCCG TCGCCCATAT GATCTTGCCC GCCATTGTGC TGGGTACTAT TCCGCTGGCG GTCATTGTGC GTATGACACG CTCCTCGATG CTGGAAGTGC TGGGTGAAGA TTACATCCGC ACCGCGCGCG CCAAAGGGTT GACCCGCATG CGGGTGATTA TCGTCCATGC GCTGCGTAAC GCGATGCTGC CGGTAGTGAC CGTTATCGGC CTCCAGGTGG GAACATTGCT GGCGGGGGCG ATTCTGACCG AAACCATCTT CTCGTGGCCC GGTCTGGGGC GCTGGTTGAT TGACGCACTG CAACGGCGCG ATTATCCGGT GGTGCAGGGC GGCGTATTGC TGGTGGCGAC GATGATTATC CTCGTCAACC TGCTGGTCGA TCTGCTGTAT GGCGTGGTGA ACCCGCGTAT TCGTCATAAG AAGTAA
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Protein sequence | MPLRAAPSGS NTSFPARPGR ELICEQYRHA VPGCGSLQRI RVMLQFILRR LGLVIPTFIG ITLLTFAFVH MIPGDPVMIM AGERGISPER HAQLLAELGL DKPMWQQYLH YIWGVMHGDL GISMKSRIPV WEEFVPRFQA TLELGVCAMI FATAVGIPVG VLAAVKRGSI FDHTAVGLAL TGYSMPIFWW GMMLIMLVSV HWNLTPVSGR VSDMVFLDDS NPLTGFMLID TAIWGEDGNF IDAVAHMILP AIVLGTIPLA VIVRMTRSSM LEVLGEDYIR TARAKGLTRM RVIIVHALRN AMLPVVTVIG LQVGTLLAGA ILTETIFSWP GLGRWLIDAL QRRDYPVVQG GVLLVATMII LVNLLVDLLY GVVNPRIRHK K
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