Gene ECH74115_4884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4884 
Symbol 
ID6967628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4517556 
End bp4518527 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content52% 
IMG OID643388572 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002273000 
Protein GI209396325 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGAAA AAATAATAAA CAATGCGATA TGCGCGTTAC TGTTTCGCTG TGAACAACAA 
TCGGTCAAAG AAATGGATAA AATTCACGCA ATGCAGTTGT TCATCAAAGT CGCGGAGCTG
GAAAGTTTTT CCCGCGCAGC GGATTTCTTT GCTTTGCCAA AAGGAAGTGT TTCGCGCCAG
ATACAGGCAC TGGAACATCA ACTTGGCACC CAGCTTCTCC AGCGCACCAC GCGACGGGTC
AAACTCACGC CAGAAGGCAT GACCTATTAT CAACGAGCAA AAGATGTGTT GAGTAATCTC
AACGAACTGG ACGGTCTGTT TCAGCAGGAT GCCACCAGTA TCAGCGGTAA ATTACGCATC
GACATCCCGC CAGGAATCGC AAAAAGCCTG TTACTGCCGC ACCTGTCGGA ATTTCTCTAT
CAGCATCCGG GAATTGAGCT GGAACTGAGT AGCCATGACC GTCCGGTAGA TATTCTTCAT
GATGGTTTTG ATTGCGTGAT ACGCACTGGC GCGTTACCGG AAGATGGCGT TATCGCCCGT
CCCCTCGGCA AACTGACCAT GGTCAACTGT GCCAGTCCGC ACTATCTGAC GCGCTTTGGT
TATCCGCAAA ACCCCGACGA TCTCACTTCA CACGCAATAG TGCGTTATAC ACCGCACCTG
GGTGTACATC CGTTAGGTTT TGAGGTTGCC AGCGTTAATG GCGTCCAGTG GTTTAAGTCT
GGCGGCATGT TGACGGTAAA CAGTAGCGAA AACTATCTCG CCGCCGGTCT TGCCGGTCTG
GGGATTATTC AGATCCCGCG CATTGCCGTG CGCGAAGCCC TGCGTGCCGG GCGGCTTATT
GAAGTGTTGC CAGGCTACCG TGCCGAGCCG CTCTCCCTTT CGCTGGTTTA TCCGCAGCGT
CGGGAGCTTT CCCGGCGTGT AAACCTGTTT ATGCAGTGGC TGGCTGGCGT AATGAAAGAG
TACCTGGACT GA
 
Protein sequence
MLEKIINNAI CALLFRCEQQ SVKEMDKIHA MQLFIKVAEL ESFSRAADFF ALPKGSVSRQ 
IQALEHQLGT QLLQRTTRRV KLTPEGMTYY QRAKDVLSNL NELDGLFQQD ATSISGKLRI
DIPPGIAKSL LLPHLSEFLY QHPGIELELS SHDRPVDILH DGFDCVIRTG ALPEDGVIAR
PLGKLTMVNC ASPHYLTRFG YPQNPDDLTS HAIVRYTPHL GVHPLGFEVA SVNGVQWFKS
GGMLTVNSSE NYLAAGLAGL GIIQIPRIAV REALRAGRLI EVLPGYRAEP LSLSLVYPQR
RELSRRVNLF MQWLAGVMKE YLD