| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4879 |
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| Symbol | gadB |
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| ID | 6967105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4511393 |
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| End bp | 4512793 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643388567 |
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| Product | glutamate decarboxylase GadB |
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| Protein accession | YP_002272995 |
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| Protein GI | 209396955 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAGA AGCTGTTAAC GGATTTCCGC TCAGAACTAC TCGATTCACG TTTTGGCGCA
AAGGCCATTT CTACTATCGC GGAGTCAAAA CGATTTCCGC TGCACGAAAT GCGCGATGAT
GTCGCATTCC AGATTATCAA TGATGAATTA TATCTTGATG GCAACGCTCG TCAGAACCTG
GCCACTTTCT GCCAGACCTG GGACGACGAA AACGTCCATA AATTGATGGA TTTGTCGATC
AATAAAAACT GGATCGACAA AGAAGAATAT CCGCAATCCG CAGCCATCGA CCTGCGTTGC
GTAAACATGG TTGCCGATCT GTGGCATGCG CCTGCGCCGA AAAATGGTCA GGCCGTTGGC
ACCAACACCA TTGGTTCTTC CGAGGCTTGT ATGCTTGGCG GGATGGCGAT GAAATGGCGT
TGGCGCAAGC GTATGGAAGC TGCAGGCAAA CCAACGGATA AACCAAACCT GGTGTGCGGT
CCGGTGCAAA TCTGCTGGCA TAAATTCGCT CGCTACTGGG ATGTGGAGCT GCGCGAGATC
CCTATGCGCC CCGGTCAGTT GTTTATGGAC CCGAAACGCA TGATTGAAGC CTGCGACGAA
AACACCATCG GCGTGGTGCC GACTTTCGGC GTGACCTACA CCGGTAACTA TGAGTTCCCG
CAACCGCTGC ACGATGCACT GGATAAATTC CAGGCCGACA CCGGTATCGA CATCGACATG
CACATCGACG CTGCCAGCGG TGGCTTCCTG GCACCGTTCG TCGCCCCGGA TATCGTCTGG
GACTTCCGCC TGCCGCGTGT GAAATCGATC AGTGCTTCAG GCCATAAATT CGGTCTGGCT
CCGCTGGGCT GCGGCTGGGT GATCTGGCGT GATGAAGAAG CGCTGCCGCA GGAACTGGTG
TTCAACGTTG ACTACCTCGG TGGTCAGATT GGTACTTTCG CCATCAACTT CTCCCGCCCG
GCGGGTCAGG TGATTGCGCA GTATTATGAA TTCCTGCGCC TCGGTCGTGA AGGCTATACC
AAAGTACAGA ACGCCTCTTA CCAGGTTGCC GCTTATCTGG CGGATGAAAT CGCCAAACTG
GGGCCGTATG AGTTCATCTG TACGGGTCGT CCGGACGAAG GCATCCCGGC GGTTTGCTTC
AAACTGAAAG AGGGTGAAGA TCCGGGATAC ACCCTGTACG ACCTCTCTGA ACGTCTGCGT
CTGCGCGGCT GGCAGGTTCC GGCCTTCACT CTCGGCGGTG AAGCCACCGA CATCGTGGTG
ATGCGCATTA TGTGTCGTCG CGGCTTCGAA ATGGACTTTG CTGAACTGTT GCTGGAAGAC
TACAAAGCCT CCCTGAAATA TCTCAGCGAT CACCCGAAAC TGCAGGGTAT TGCCCAGCAG
AACAGCTTTA AACACACCTG A
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| Protein sequence | MDQKLLTDFR SELLDSRFGA KAISTIAESK RFPLHEMRDD VAFQIINDEL YLDGNARQNL
ATFCQTWDDE NVHKLMDLSI NKNWIDKEEY PQSAAIDLRC VNMVADLWHA PAPKNGQAVG
TNTIGSSEAC MLGGMAMKWR WRKRMEAAGK PTDKPNLVCG PVQICWHKFA RYWDVELREI
PMRPGQLFMD PKRMIEACDE NTIGVVPTFG VTYTGNYEFP QPLHDALDKF QADTGIDIDM
HIDAASGGFL APFVAPDIVW DFRLPRVKSI SASGHKFGLA PLGCGWVIWR DEEALPQELV
FNVDYLGGQI GTFAINFSRP AGQVIAQYYE FLRLGREGYT KVQNASYQVA AYLADEIAKL
GPYEFICTGR PDEGIPAVCF KLKEGEDPGY TLYDLSERLR LRGWQVPAFT LGGEATDIVV
MRIMCRRGFE MDFAELLLED YKASLKYLSD HPKLQGIAQQ NSFKHT
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