| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4877 |
|---|
| Symbol | gadX |
|---|
| ID | 6972303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 4510198 |
|---|
| End bp | 4511022 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643388565 |
|---|
| Product | DNA-binding transcriptional regulator GadX |
|---|
| Protein accession | YP_002272993 |
|---|
| Protein GI | 209398111 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCAT TACATGGGAA TTGTCTAATT GCGTACGCAA GACATAAATA TATTCTCACC
ATGGTTAATG GTGAATATCG CTATTTTAAT GGCGGTGACC TGGTTTTTGC GGATGCAAGC
CAAATTCGAG TAGATAAGTG TGTTGAAAAT TTTGTATTAG TATCAAGGGA TACGCTTTCA
TTATTTCTCC CGATGCTCAA GGAGGAGGCA TTAAATCTTC ATGCACATAA AAAAGTTTCT
TCATTACTCG TTCATCACTG TAGCAGAGAT ATTCCTGTTT TTCAGGAAGT TGCGCAACTA
TCGCAGAATA AGAATCTTCG CTATGCAGAA ATGCTACGTA AAAGAGCATT AATCTTTGCG
TTGTTATCTG TTTTTCTTGA GGATGATCAC TTTATACCGC TGCTTCTGAA CGTTTTACAA
CCGAACATGC GAACACGAGT TTGTACGGTT ATCAATAATA ATATCGCTCA TGAGTGGACA
CTAGCCCGAA TCGCCAGCGA GCTGTTGATG AGTCCAAGTC TGTTAAAGAA AAAATTACGC
GAAGAAGAGA CATCATATTC ACAGTTGCTT ACTGAGTGTA GAATGCAACG TGCTTTGCAA
CTTATTGTTA TACATGGTTT TTCAATTAAG CGAGTCGCAG TGTCCTGTGG ATATCACAGC
GTGTCGTATT TCATTTACGT CTTTCGAAAT TATTATGGGA TGACGCCCAC AGAGTATCAG
GAGCGATCGG CGCAGGGATT GCCGAACCGT GACTCGGCGG CAAGTATTGT TGCGCAAGGG
AATTTTTACG GCACTGACTG TTCTGCGGAA GGAATAAGAT TATAG
|
|---|
| Protein sequence | MQSLHGNCLI AYARHKYILT MVNGEYRYFN GGDLVFADAS QIRVDKCVEN FVLVSRDTLS
LFLPMLKEEA LNLHAHKKVS SLLVHHCSRD IPVFQEVAQL SQNKNLRYAE MLRKRALIFA
LLSVFLEDDH FIPLLLNVLQ PNMRTRVCTV INNNIAHEWT LARIASELLM SPSLLKKKLR
EEETSYSQLL TECRMQRALQ LIVIHGFSIK RVAVSCGYHS VSYFIYVFRN YYGMTPTEYQ
ERSAQGLPNR DSAASIVAQG NFYGTDCSAE GIRL
|
|---|
| |