Gene ECH74115_4822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4822 
Symbol 
ID6968808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4456870 
End bp4457616 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content42% 
IMG OID643388514 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002272942 
Protein GI209397083 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAT TAAGTAAGTC GTCACAAATA CCGCTCTATC AACAAGTGGT GGAGTGGATA 
AGAGAAAGTA TTTATACCGG AGATCTGGTG GAAGACGATC GCATTCCTTC GGAATACCAG
ATTATGGATA TGCTGGACGT GAGTCGGGGA ACCGTTAAAA AAGCGGTCGC CCAACTGGTA
AAAGAAGGCG TGTTAATACA GGTCCAGGGT AAGGGAACAT TTGTCAAAAA AGAGAACGTG
GCATATCCGT TAGGTGAAGG ATTATTGTCA TTCGCGGAAT CGCTGGAAAG CCAGAAAATA
CATTTTACCA CTGAAGTTAT TACGTCACGG ATTGAATCGG CTAATCGTTA TGTGGCAGAG
AAATTAAGAA TAACGCCCGG TCAGGATATT CTTTACCTTG AACGCTTACG CTCAATTGGT
GATGAAAAAG CGATGCTGAT AGAGAACCGT ATCAATATTG AGCTATGCCC CGGTATTGCT
GAAATCGATT TTAATCAACA CAATTTATTT CCAACAATAG AAAGTTTGTC GCAAAGAAAA
ATTCGTTACT CGGAAAGTCG CTATGCCGCG CGATTAATTG GTAATGAACG TGGTCATTTT
TTAGATATCA GTGAAGACGC ACCCGTTTTG CATCTGGAGC AGTTAGTCTT TTTCTCCCGA
GGATTACCCA TTGAGTTTGG CAACGTCTGG TTAAAAGGAA ATAAATATTA TCTTGGCACC
GTACTGCAAC GGCGGGAAGT GAGTTAA
 
Protein sequence
MKSLSKSSQI PLYQQVVEWI RESIYTGDLV EDDRIPSEYQ IMDMLDVSRG TVKKAVAQLV 
KEGVLIQVQG KGTFVKKENV AYPLGEGLLS FAESLESQKI HFTTEVITSR IESANRYVAE
KLRITPGQDI LYLERLRSIG DEKAMLIENR INIELCPGIA EIDFNQHNLF PTIESLSQRK
IRYSESRYAA RLIGNERGHF LDISEDAPVL HLEQLVFFSR GLPIEFGNVW LKGNKYYLGT
VLQRREVS