| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4785 |
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| Symbol | rsmD |
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| ID | 6969411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 4426720 |
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| End bp | 4427316 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643388481 |
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| Product | 16S rRNA m(2)G966-methyltransferase |
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| Protein accession | YP_002272909 |
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| Protein GI | 209398100 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0742] N6-adenine-specific methylase |
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| TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAC CGAATCATTC CGGCAGCGGC CAAATCCGCA TTATTGGCGG GCAGTGGCGA
GGCCGTAAAC TCCCGGTTCC TGATAGCCCA GGTCTGCGCC CCACCACCGA CCGCGTACGC
GAAACGTTGT TTAACTGGCT GGCTCCGGTC ATTGTTGACG CCCAATGTCT GGATTGCTTC
GCCGGGAGCG GCGCGCTGGG GCTGGAAGCG TTATCGCGCT ACGCTGCGGG GGCCACGTTA
ATTGAGATGG ATCGTGCAGT TTCTCAGCAG TTAATTAAGA ATCTGGCGAC ACTAAAAGCA
GGCAATGCAC GCGTGGTGAA CAGCAACGCA ATGTCATTCC TGGCGCAAAA AGGCACACCG
CATAATATCG TGTTTGTCGA TCCACCGTTC CGCCGTGGTT TGTTAGAAGA GACGATAAAT
TTACTGGAAG ATAACGGCTG GCTGGCTGAC GAAACCCTGA TTTATGTCGA AAGCGAAGTC
GAAAACGGTC TGCCCACCGT TCCGGCAAAC TGGTCGTTAC ATCGGGAAAA AGTGGCGGGT
CAGGTGGCTT ATCGGCTGTA TCAACGCGAA GCACAAGGAG AAAGTGATGC TGATTAA
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| Protein sequence | MKKPNHSGSG QIRIIGGQWR GRKLPVPDSP GLRPTTDRVR ETLFNWLAPV IVDAQCLDCF
AGSGALGLEA LSRYAAGATL IEMDRAVSQQ LIKNLATLKA GNARVVNSNA MSFLAQKGTP
HNIVFVDPPF RRGLLEETIN LLEDNGWLAD ETLIYVESEV ENGLPTVPAN WSLHREKVAG
QVAYRLYQRE AQGESDAD
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