Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4734 |
Symbol | glpD |
ID | 6968221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4378041 |
End bp | 4379546 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643388435 |
Product | glycerol-3-phosphate dehydrogenase |
Protein accession | YP_002272863 |
Protein GI | 209399181 |
COG category | [C] Energy production and conversion |
COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCA AAGATCTGAT TGTGATAGGT GGCGGCATCA ATGGTGCTGG TATCGCGGCA GACGCCGCTG GACGCGGTTT ATCCGTGCTG ATGCTGGAGG CGCAGGATCT CGCTTGCGCG ACCTCTTCCG CCAGTTCAAA ACTCATTCAC GGTGGCCTGC GCTACCTTGA GCACTATGAA TTCCGCCTGG TCAGCGAGGC GCTGGCTGAA CGTGAAGTGC TGCTGAAAAT GGCCCCGCAT ATCGCCTTCC CGATGCGTTT TCGCCTGCCA CATCGTCCGC ATCTGCGCCC GGCGTGGATG ATTCGCATTG GTCTGTTTAT GTACGATCAT CTGGGTAAAC GCACCAGCCT GCCGGGATCA ACTGGTTTGC GTTTTGGCGC AAATTCAGTG TTAAAACCGG AAATTAAGCG CGGATTCGAA TATTCCGACT GTTGGGTAGA CGATGCCCGT CTGGTGCTCG CCAACGCCCA GATGGTGGTG CGTAAAGGCG GCGAAGTGCT TACTCGTACT CGTGCTACTT CTGCTCGTCG CGAAAACGGC CTGTGGATTG TGGAAGCGGA AGATATCGAT ACCGGCAAAA AATATAGCTG GCAAGCGCGC GGCCTGGTTA ACGCCACCGG CCCGTGGGTG AAACAGTTCT TCGACGACGG GATGCATCTG CCTTCGCCTT ATGGCATTCG CCTGATCAAA GGCAGCCATA TTGTGGTGCC GCGCGTGCAT ACCCAAAAGC AGGCCTACAT TCTGCAAAAC GAAGATAAAC GTATTGTGTT CGTGATCCCG TGGATGGACG AGTTTTCCAT CATCGGCACC ACCGATGTGG AATACAAAGG CGATCCGAAA GCAGTGAAGA TTGAAGAGAG TGAAATCAAT TACCTGCTGA AAGTGTATAA CGCGCACTTT AAAAAACAGC TTAGCCGTGA CGATATCGTC TGGACCTACT CCGGTGTGCG TCCGCTGTGT GATGATGAGT CCGACTCGCC GCAGGCTATT ACCCGTGATT ACACCCTTGA TATTCATGAT GAAAATGGCA AAGCACCGCT GCTGTCGGTA TTCGGCGGTA AGCTGACCAC CTACCGAAAA CTGGCGGAAC ATGCGCTGGA AAAACTAACG CCGTATTATC AGGGTATTGG CCCGGCATGG ACGAAAGAGA GCGTGCTACC GGGTGGCGCC ATCGAGGGCG ACCGCGACGA TTATGCCGCT CGCTTACGCC GCCGTTATCC GTTCCTGACC GAATCGCTGG CACGTCATTA CGCGCGTACT TATGGCAGCA ACAGCGAGCT GCTGCTCGGC AATGCGGGAG CGGTAAGCGA TCTTGGGGAA GATTTCGGTC ATGAGTTCTA CGAAACGGAG CTGAAATATC TGGTCGACCA CGAGTGGGTC CGCCGCGCCG ACGATGCCCT GTGGCGTCGC ACAAAACAAG GCATGTGGCT GAATGCGGAT CAACAATCTC GTGTGAGTCA GTGGCTGGTG GAATATACGC AGCAGAAGTT GTCGCTGGCG TCGTAA
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Protein sequence | METKDLIVIG GGINGAGIAA DAAGRGLSVL MLEAQDLACA TSSASSKLIH GGLRYLEHYE FRLVSEALAE REVLLKMAPH IAFPMRFRLP HRPHLRPAWM IRIGLFMYDH LGKRTSLPGS TGLRFGANSV LKPEIKRGFE YSDCWVDDAR LVLANAQMVV RKGGEVLTRT RATSARRENG LWIVEAEDID TGKKYSWQAR GLVNATGPWV KQFFDDGMHL PSPYGIRLIK GSHIVVPRVH TQKQAYILQN EDKRIVFVIP WMDEFSIIGT TDVEYKGDPK AVKIEESEIN YLLKVYNAHF KKQLSRDDIV WTYSGVRPLC DDESDSPQAI TRDYTLDIHD ENGKAPLLSV FGGKLTTYRK LAEHALEKLT PYYQGIGPAW TKESVLPGGA IEGDRDDYAA RLRRRYPFLT ESLARHYART YGSNSELLLG NAGAVSDLGE DFGHEFYETE LKYLVDHEWV RRADDALWRR TKQGMWLNAD QQSRVSQWLV EYTQQKLSLA S
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