Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4709 |
Symbol | pckA |
ID | 6968247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4348092 |
End bp | 4349714 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643388410 |
Product | phosphoenolpyruvate carboxykinase |
Protein accession | YP_002272838 |
Protein GI | 209399361 |
COG category | [C] Energy production and conversion |
COG ID | [COG1866] Phosphoenolpyruvate carboxykinase (ATP) |
TIGRFAM ID | [TIGR00224] phosphoenolpyruvate carboxykinase (ATP) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTTA ACAATGGTTT GACCCCGCAA GAACTCGAGG CTTATGGTAT CAGTGACGTA CATGATATCG TTTACAACCC AAGCTACGAC CTGCTGTATC AGGAAGAGCT CGATCCGAGC CTGACAGGTT ATGAGCGCGG GGTGTTAACT AATCTGGGTG CCGTTGCCGT CGATACCGGG ATCTTCACCG GTCGTTCACC AAAAGATAAG TATATCGTCC GTGACGATAC CACTCGCGAT ACTTTCTGGT GGGCAGACAA AGGCAAAGGT AAGAACGATA ACAAACCTCT CTCTCCGGAA ACCTGGCAAC ATCTGAAAGG CCTGGTGACC AAACAGCTTT CCGGCAAACG TCTGTTCGTT GTCGACGCCT TCTGTGGTGC GAACCCGGAT ACTCGTCTTT CCGTCCGTTT CATCACCGAA GTGGCCTGGC AGGCGCATTT TGTCAAAAAC ATGTTTATTC GCCCGAGCGA TGAAGAGTTG GCAGGTTTCA AACCAGACTT TATCGTTATG AACGGCGCGA AGTGCACTAA CCCGCAGTGG AAAGAACAGG GTCTGAATTC CGAAAACTTC GTGGCTTTTA ACCTGACCGA GCGCATGCAG CTGATTGGCG GCACCTGGTA TGGCGGCGAA ATGAAGAAAG GGATGTTCTC GATGATGAAC TACCTGCTGC CGCTGAAAGG TATCGCTTCT ATGCACTGCT CCGCCAACGT TAGCGAGAAA GGCGATGTTG CGGTGTTCTT CGGCCTTTCC GGCACCGGTA AAACCACCCT TTCCACCGAC CCGAAACGTC GCCTGATTGG CGATGACGAA CACGGCTGGG ACGATGACGG CGTGTTTAAC TTCGAAGGCG GCTGCTACGC AAAAACTATC AAGCTGTCGA AAGAAGCGGA ACCTGAAATC TACAACGCTA TCCGTCGCGA TGCGCTGCTG GAAAACGTCA CCGTGCGTGA AGATGGCACT ATCGACTTTG ATGATGGTTC AAAAACCGAG AACACCCGCG TTTCTTATCC GATCTATCAC ATCGATAACA TCGTTAAGCC GGTTTCAAAA GCGGGTCACG CAACGAAAGT TATCTTCCTG ACCGCAGACG CCTTTGGTGT GCTGCCACCG GTTTCTCGTC TGACTGCCGA TCAAACCCAG TACCACTTCC TCTCTGGCTT CACCGCCAAA CTGGCCGGTA CTGAGCGTGG CATCACCGAA CCGACGCCAA CCTTCTCCGC TTGCTTCGGC GCGGCATTCC TGTCGCTGCA CCCGACTCAG TACGCAGAAG TGCTGGTGAA ACGTATGCAG GCGGCGGGCG CGCAGGCTTA TCTGGTTAAC ACTGGCTGGA ACGGCACTGG CAAACGTATC TCGATTAAAG ATACCCGCGC CATTATCGAC GCCATCCTCA ACGGTTCGCT GGATAATGCA GAAACCTTCA CTCTGCCGAT GTTTAACCTG GCGATCCCAA CCGAACTGCC GGGCGTAGAC ACGAAGATTC TCGATCCGCG TAACACCTAC GCTTCCCCGG AACAGTGGCA GGAAAAAGCC GAAACCCTGG CGAAACTGTT TATCGACAAC TTTGATAAAT ACACCGACAC CCCTGCGGGT GCCGCGCTGG TAGCGGCTGG TCCGAAACTG TAA
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Protein sequence | MRVNNGLTPQ ELEAYGISDV HDIVYNPSYD LLYQEELDPS LTGYERGVLT NLGAVAVDTG IFTGRSPKDK YIVRDDTTRD TFWWADKGKG KNDNKPLSPE TWQHLKGLVT KQLSGKRLFV VDAFCGANPD TRLSVRFITE VAWQAHFVKN MFIRPSDEEL AGFKPDFIVM NGAKCTNPQW KEQGLNSENF VAFNLTERMQ LIGGTWYGGE MKKGMFSMMN YLLPLKGIAS MHCSANVSEK GDVAVFFGLS GTGKTTLSTD PKRRLIGDDE HGWDDDGVFN FEGGCYAKTI KLSKEAEPEI YNAIRRDALL ENVTVREDGT IDFDDGSKTE NTRVSYPIYH IDNIVKPVSK AGHATKVIFL TADAFGVLPP VSRLTADQTQ YHFLSGFTAK LAGTERGITE PTPTFSACFG AAFLSLHPTQ YAEVLVKRMQ AAGAQAYLVN TGWNGTGKRI SIKDTRAIID AILNGSLDNA ETFTLPMFNL AIPTELPGVD TKILDPRNTY ASPEQWQEKA ETLAKLFIDN FDKYTDTPAG AALVAAGPKL
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