Gene ECH74115_4676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4676 
SymbolnirB 
ID6967204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4316997 
End bp4319540 
Gene Length2544 bp 
Protein Length847 aa 
Translation table11 
GC content54% 
IMG OID643388380 
Productnitrite reductase [NAD(P)H], large subunit 
Protein accessionYP_002272808 
Protein GI209400899 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID[TIGR02374] nitrite reductase [NAD(P)H], large subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.54103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAG TCAGACTCGC AATTATCGGT AACGGTATGG TCGGCCATCG CTTTATCGAA 
GATCTTCTTG ATAAATCTGA TGCGGCCAAC TTTGATATTA CCGTTTTCTG TGAAGAACCG
CGCATCGCTT ATGACCGCGT ACACCTCTCG TCTTACTTCT CTCACCACAC CGCCGAAGAG
CTGTCGCTGG TGCGCGAAGG CTTCTACGAG AAACACGGCA TCAAAGTTCT GGTCGGCGAA
CGCGCTATCA CCATCAACCG TCAGGAGAAG GTGATTCACT CCAGCGCCGG ACGTACCGTT
TTTTATGACA AGCTGATCAT GGCGACCGGT TCCTACCCGT GGATCCCGCC AATTAAAGGT
TCTGATACTC AGGACTGCTT TGTCTATCGC ACCATTGAAG ACCTCAACGC CATTGAATCC
TGCGCCCGTC GCAGCAAACG CGGTGCCGTT GTTGGTGGCG GCCTGTTAGG TCTGGAAGCC
GCTGGCGCGC TGAAAAACTT AGGTATTGAA ACCCACGTTA TCGAATTTGC CCCTATGCTG
ATGGCAGAAC AGCTTGATCA GATGGGTGGC GAGCAGCTGC GTCGCAAAAT CGAGAGCATG
GGCGTGCGCG TTCACACCAG CAAAAACACC CTTGAGATTG TGCAGGAAGG TGTTGAAGCG
CGTAAAACCA TGCGTTTTGC CGACGGCAGC GAACTGGAAG TCGACTTTAT CGTCTTCTCT
ACCGGTATCC GTCCGCGCGA TAAGCTGGCA ACCCAGTGTG GTCTGGACGT TGCTCCGCGT
GGGGGTATTG TCATTAATGA TTCCTGCCAG ACTTCCGATC CGGATATCTA CGCCATCGGT
GAATGCGCAA GCTGGAACAA CCGTGTATTT GGTCTGGTAG CACCAGGCTA CAAAATGGCG
CAGGTCGCCG TTGACCATAT TCTCGGTAGC GAAAACGCCT TTGAAGGTGC TGACCTTAGC
GCCAAGCTGA AACTGCTGGG CGTAGACGTA GGCGGTATTG GTGATGCGCA CGGTCGCACG
CCTGGCGCAC GTAGCTACGT TTACCTCGAC GAAAGCAAAG AGATCTACAA ACGCCTTATT
GTCAGCGAAG ACAACAAAAC CCTGCTCGGT GCGGTACTGG TGGGCGATAC CAGCGACTAC
GGCAACCTGC TGCAACTGGT GCTGAATGCT ATCGAGCTGC CGGAAAACCC GGATTCTCTG
ATTCTGCCGG CGCACTCGGG TAGCGGTAAG CCGTCTATCG GTGTTGATAA ACTGCCGGAC
AGCGCGCAAA TCTGCTCCTG CTTCGACGTC ACCAAAGGTG ATCTGATTGC TGCCATCAAC
AAAGGCTGTC ACACCGTTGC GGCGCTGAAA GCCGAAACCA AAGCGGGTAC TGGCTGCGGT
GGCTGTATCC CGCTGGTCAC TCAGGTACTG AACGCGGAAC TGGCGAAACA GGGCATCGAA
GTTAACAACA ACCTGTGCGA ACACTTTGCT TATTCGCGTC AGGAACTATT CCATTTGATC
CGCGTTGAAG GCATTAAAAC CTTCGAAGAA CTGCTGGCGA AACACGGCAA AGGTTACGGT
TGTGAAGTTT GTAAACCGAC CGTCGGTTCG CTGCTGGCCT CCTGCTGGAA CGAATACATT
CTGAAGCCGG AACATACTCC GCTGCAGGAT TCTAACGACA ACTTCCTCGC TAACATCCAG
AAAGACGGCA CCTACTCGGT GATCCCGCGC TCTCCGGGCG GTGAAATCAC CCCGGAAGGG
CTGATGGCGG TAGGTCGTAT CGCGCGTGAA TTTAATCTCT ACACCAAGAT CACTGGCTCC
CAGCGTCTGG CGATGTTTGG CGCACAGAAA GACGATCTGC CGGAGATCTG GCGTCAGCTG
ATTGAAGCCG GCTTCGAAAC CGGTCATGCC TATGCGAAAG CACTGCGTAT GGCGAAAACC
TGCGTGGGTA GCACCTGGTG CCGCTACGGC GTTGGCGACA GCGTCGGCCT CGGCGTGGAA
CTGGAAAACC GCTACAAAGG CATCCGTACG CCGCACAAAA TGAAGTTCGG TGTCTCCGGC
TGTACCCGTG AATGTTCAGA AGCTCAGGGT AAAGACGTGG GTATTATCGC CACTGAAAAA
GGCTGGAACC TGTATGTTTG CGGTAACGGC GGCATGAAAC CGCGTCATGC GGATCTGCTG
GCGGCGGATA TCGATCGCGA AACGCTGATC AAATATCTCG ACCGCTTCAT GATGTTCTAC
ATCCGTACTG CCGACAAACT GACGCGTACC GCACCGTGGT TAGAAAACCT CGAAGGCGGC
ATCGATTACC TGAAAGCGGT GATCATTGAC GACAAACTGG GGCTGAACGC ACATCTGGAA
GAAGAGATGG CGCGCCTGCG TGAAGCGGTA GTGTGTGAGT GGACTGAAAC GGTCAATACG
CCGTCTGCGC AGACTCGCTT CAAACACTTC ATCAACAGCG ACAAGCGTGA CCCGAACGTG
CAGATGGTGC CAGAGCGCGA ACAGCACCGT CCGGCAACGC CGTATGAACG TATCCCAGTA
ACTCTGGTGG AGGACAACGC ATGA
 
Protein sequence
MSKVRLAIIG NGMVGHRFIE DLLDKSDAAN FDITVFCEEP RIAYDRVHLS SYFSHHTAEE 
LSLVREGFYE KHGIKVLVGE RAITINRQEK VIHSSAGRTV FYDKLIMATG SYPWIPPIKG
SDTQDCFVYR TIEDLNAIES CARRSKRGAV VGGGLLGLEA AGALKNLGIE THVIEFAPML
MAEQLDQMGG EQLRRKIESM GVRVHTSKNT LEIVQEGVEA RKTMRFADGS ELEVDFIVFS
TGIRPRDKLA TQCGLDVAPR GGIVINDSCQ TSDPDIYAIG ECASWNNRVF GLVAPGYKMA
QVAVDHILGS ENAFEGADLS AKLKLLGVDV GGIGDAHGRT PGARSYVYLD ESKEIYKRLI
VSEDNKTLLG AVLVGDTSDY GNLLQLVLNA IELPENPDSL ILPAHSGSGK PSIGVDKLPD
SAQICSCFDV TKGDLIAAIN KGCHTVAALK AETKAGTGCG GCIPLVTQVL NAELAKQGIE
VNNNLCEHFA YSRQELFHLI RVEGIKTFEE LLAKHGKGYG CEVCKPTVGS LLASCWNEYI
LKPEHTPLQD SNDNFLANIQ KDGTYSVIPR SPGGEITPEG LMAVGRIARE FNLYTKITGS
QRLAMFGAQK DDLPEIWRQL IEAGFETGHA YAKALRMAKT CVGSTWCRYG VGDSVGLGVE
LENRYKGIRT PHKMKFGVSG CTRECSEAQG KDVGIIATEK GWNLYVCGNG GMKPRHADLL
AADIDRETLI KYLDRFMMFY IRTADKLTRT APWLENLEGG IDYLKAVIID DKLGLNAHLE
EEMARLREAV VCEWTETVNT PSAQTRFKHF INSDKRDPNV QMVPEREQHR PATPYERIPV
TLVEDNA