Gene ECH74115_4644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4644 
SymbolrpsJ 
ID6970081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4291051 
End bp4291362 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content55% 
IMG OID643388349 
Product30S ribosomal protein S10 
Protein accessionYP_002272777 
Protein GI209399386 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000052499 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.0424233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACC AAAGAATCCG TATCCGCCTG AAAGCGTTTG ATCATCGTCT GATCGATCAA 
GCAACCGCGG AAATCGTCGA GACTGCCAAG CGCACTGGTG CGCAGGTCCG TGGTCCGATC
CCGCTGCCGA CACGCAAAGA GCGCTTCACT GTTCTGATCT CCCCGCACGT CAACAAAGAC
GCGCGCGATC AGTACGAAAT CCGTACTCAC TTGCGTCTGG TTGACATCGT TGAGCCAACC
GAGAAAACCG TTGATGCTCT GATGCGTCTG GATCTGGCTG CCGGTGTAGA CGTGCAGATC
AGCCTGGGTT AA
 
Protein sequence
MQNQRIRIRL KAFDHRLIDQ ATAEIVETAK RTGAQVRGPI PLPTRKERFT VLISPHVNKD 
ARDQYEIRTH LRLVDIVEPT EKTVDALMRL DLAAGVDVQI SLG