Gene ECH74115_4642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_4642 
SymbolrplD 
ID6972004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp4289773 
End bp4290378 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content53% 
IMG OID643388347 
Product50S ribosomal protein L4 
Protein accessionYP_002272775 
Protein GI209398551 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0120541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.0370586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTAG TATTGAAAGA CGCGCAGAGC GCGCTGACTG TTTCCGAAAC TACCTTCGGT 
CGTGATTTCA ACGAAGCGCT GGTTCACCAG GTTGTTGTTG CTTATGCAGC TGGTGCTCGT
CAGGGTACTC GTGCTCAGAA GACTCGTGCT GAAGTAACTG GTTCCGGTAA AAAACCGTGG
CGCCAGAAAG GCACCGGCCG TGCGCGTTCT GGTTCTATCA AGAGCCCGAT CTGGCGTTCT
GGTGGCGTGA CCTTTGCTGC TCGTCCGCAG GACCACAGTC AAAAAGTTAA CAAGAAGATG
TACCGCGGCG CGCTGAAAAG CATCCTGTCC GAACTGGTAC GTCAGGATCG TCTGATCGTT
GTCGAGAAGT TCTCTGTAGA AGCGCCGAAA ACTAAGCTGC TGGCACAGAA ACTGAAAGAC
ATGGCTCTGG AAGATGTGCT GATCATCACC GGTGAGCTGG ACGAAAACCT GTTCCTGGCT
GCGCGCAACC TGCACAAGGT TGACGTACGC GATGCAACTG GTATCGACCC GGTTAGCCTG
ATCGCCTTCG ACAAAGTCGT AATGACTGCT GATGCTGTTA AGCAAGTTGA GGAGATGCTG
GCATGA
 
Protein sequence
MELVLKDAQS ALTVSETTFG RDFNEALVHQ VVVAYAAGAR QGTRAQKTRA EVTGSGKKPW 
RQKGTGRARS GSIKSPIWRS GGVTFAARPQ DHSQKVNKKM YRGALKSILS ELVRQDRLIV
VEKFSVEAPK TKLLAQKLKD MALEDVLIIT GELDENLFLA ARNLHKVDVR DATGIDPVSL
IAFDKVVMTA DAVKQVEEML A