| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4627 |
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| Symbol | rplR |
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| ID | 6969190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 4283336 |
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| End bp | 4283689 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643388332 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_002272760 |
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| Protein GI | 209397928 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000627366 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATAAGA AATCTGCTCG TATCCGTCGT GCGACCCGCG CACGCCGCAA GCTCCAGGAG
CTGGGCGCAA CTCGCCTGGT GGTACATCGT ACCCCGCGTC ACATTTACGC ACAGGTAATT
GCACCGAACG GTTCTGAAGT TCTGGTAGCT GCTTCTACTG TAGAAAAAGC TATCGCTGAA
CAACTGAAGT ACACCGGTAA CAAAGACGCG GCTGCAGCTG TGGGTAAAGC TGTCGCTGAA
CGCGCTCTGG AAAAAGGCAT CAAAGATGTA TCCTTTGACC GTTCCGGGTT CCAATATCAT
GGTCGTGTCC AGGCACTGGC AGATGCTGCC CGTGAAGCTG GCCTTCAGTT CTAA
|
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| Protein sequence | MDKKSARIRR ATRARRKLQE LGATRLVVHR TPRHIYAQVI APNGSEVLVA ASTVEKAIAE
QLKYTGNKDA AAAVGKAVAE RALEKGIKDV SFDRSGFQYH GRVQALADAA REAGLQF
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